Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00287 ATGATGATGAAGTGGGGAGGAAGAAAAGCTGGTTCTTCTTCTCCTTCTGTGTCTTCTCATCACCATGCTTCTTCTTTTTCTTGGTTCTCTAAGTTAAAGCACATGAGAATCAACTCATCATCCGAGCCAACTACTACTACTCATCATGCAAACATCAAGAAGCAGAAGCCACCATACCAGAATAATACTTCTGATGCTGTTACTACTGCTTCTTCTACTGTTGCTGATGATGCTTCTTCTTCTTTATTTCACGATGAAGATAATTTTATTGACTCTTCTTCAAGTTTCCCTGCTGCTGCTAGAAGAAACAGTAGTGCTATGAAGCACACAGCAAGAGAAGGTGCTCTCATCAACAACAACAAGAACAAGTTGAAGAAGGAGAAAAAGGAGAGTGGTATTATTCAAAAGGAAGAAAGAAAATTTGTGGATGATAGGAAGGTTGAAATGGAGATGCAAGAGTACACTAGAGATGACAAGGAATATGAAAACCTAAGGAGGAGATTTGAGAGGAAAGCTCAAAAGGTTTTGCAAGAGCAACTCTTCAACTTAGAAAAAGAAAGAGGAAGAGAATCAAGAAAATTAGTACAAGAGATCAAAGATGTGGAGATGCAGTTGGATTCACCAAGAACAATATGCACACCAAGGATACATTATTCACTCCCATCTTCATCTGATTCCAAGAGTTCGAATTCTGTTAGAAGTAAGAAGAATAATGATATTTTGGAGAAGAAACTGATGATGAATCCTACTGATGAGGAGTTGAACTCGAACTTGAACTTGAAGGTGAAGACCAAGAAAAAGAAGCAACAAACAGTAGTTGATGGAAACAGCAGCAGAGAAATTATTCATCAGAGGAGGAAATCAAAGCATAGCCCCAGAATCAGAATACATTCTCCAAGGATGTCTTCTCCCAAGATTGATCAAGTTTGCAGAATAAAGGCTATAGAAGACATGAAGAAAGCAAGACTGAAGATGAAGAAAGAAAGAGAGGAGATTATTGTGCAGGAAGCACTACTCACAAAAGGGTCAGAAGATAGATTTGCTGTTATAAAATGTTCATTGGATCCAAGAAAAGATTTCAGAGACTCTATGATTGAGATGATCATTGAGAAGCAGATTAGAAACCCAGAAGAAATGGAAGAGCTTCTGGCATGTTATCTGACATTGAATGCTGATGAGTATCATGATCTCATCATTCAAGTTTTCAGGCAAGTTTGGTTTCAAATGAGCTATGGTGCTTAA 1242 0.3792 MMMKWGGRKAGSSSPSVSSHHHASSFSWFSKLKHMRINSSSEPTTTTHHANIKKQKPPYQNNTSDAVTTASSTVADDASSSLFHDEDNFIDSSSSFPAAARRNSSAMKHTAREGALINNNKNKLKKEKKESGIIQKEERKFVDDRKVEMEMQEYTRDDKEYENLRRRFERKAQKVLQEQLFNLEKERGRESRKLVQEIKDVEMQLDSPRTICTPRIHYSLPSSSDSKSSNSVRSKKNNDILEKKLMMNPTDEELNSNLNLKVKTKKKKQQTVVDGNSSREIIHQRRKSKHSPRIRIHSPRMSSPKIDQVCRIKAIEDMKKARLKMKKEREEIIVQEALLTKGSEDRFAVIKCSLDPRKDFRDSMIEMIIEKQIRNPEEMEELLACYLTLNADEYHDLIIQVFRQVWFQMSYGA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00287 413 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 348 409 IPR006458 -
Aip10g00287 413 Pfam Transcriptional repressor, ovate 353 409 IPR006458 -
Aip10g00287 413 Coils Coil 311 331 - -
Aip10g00287 413 MobiDBLite consensus disorder prediction 214 240 - -
Aip10g00287 413 MobiDBLite consensus disorder prediction 106 131 - -
Aip10g00287 413 Coils Coil 151 178 - -
Aip10g00287 413 MobiDBLite consensus disorder prediction 216 235 - -
Aip10g00287 413 MobiDBLite consensus disorder prediction 37 72 - -
Aip10g00287 413 ProSiteProfiles OVATE domain profile. 349 408 IPR006458 -
Aip10g00287 413 MobiDBLite consensus disorder prediction 1 21 - -
Aip10g00287 413 PANTHER TRANSCRIPTION REPRESSOR OFP4 17 409 - -
Aip10g00287 413 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 17 409 IPR038933 GO:0045892
Aip10g00287 413 MobiDBLite consensus disorder prediction 264 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00287 Aip-Chr10 2971029 2972270 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aip10g00287 Ovate 8.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00287 - - ahf:112783885 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00287 10 2971029 2972270 Aip10g00287 10 2971029 2972270 ECH