Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00274 ATGCAACTTCTCAACTTCTTTGGCTTCTTACTTGTTACACTTTGTTGCTTCCAGTTGCTGACAATATCCGAATCAAAATTACCAAAAGAAGAAGTTGAAGCTCTCAAAGAAATTACCAGTACAATGGGGGCGGTCTATTGGGAGTTTGATAATGATTCCTGTGACATTATAAGGGTTGGACTAACTCGAGAACCTCCTGACGAATCGGAGAGAAGCATTGTTTGTGACTGCAGTTTTGAAAATAATACTGTCTGTCATGTTACTAAGATAACCCTCAAGCGCCTTAGTCTACCTGGAGCACTCCCACCTCAACTGGTCAAGCTACCTTTTCTTCAAGTGATAGATTTTGCATACAATTGTTTAAATGGCACAATTCCAAAGGAATGGGCTTCAATGAATTTAACTTCCATCTCTCTTCTTGTGAATCGCTTGTCAGGGGAAATTCCAAAGCATGTAGGAAATATTACTGCTCTCACATACCTGATGCTGGAAGCAAACAATTTTTCTGGAGTTGTTCCACCTGAACTTGGGAAGCTAATCAACTTGCAGACCTTGGTACTGTCATCAAATCAGTTGACCGGGAACTTACCATCGGCACTTGCTGGGCTGCAAAATTTAACCGACTTTAGGATAAGTAGTAACAACTTTACAGGAACCATACCTGATTTCATAAAGAACTGGCAATTTCTCCAAAGACTAGAAATGCATGGAAGTGGACTAGAAGGACCGATTCCATCGAGTATATCTCTATTGAAGAACTTACTTCAGTTAAGAATCAGTGATATAAAAAGTCCTAGCCAGGTTTTTCCTTCACTGCAGAGCATGACAGCACTAACTACATTGGTTTTAAGGAACTGTAACCTGTCTGGGGAGATACCTTCATACATATGGACCTTGACAAATCTAGCAACTTTGGATGTCAGTTTTAACAAGCTAGTTGGGAAAATTCCCGAAGTCATTAATGTAAAGCGTATGAGATACATCTACCTAACAGGTAACATGCTCAGTGGAAATGTACCAAAGTCAATACTGAAGGATGGAAGTAGCATTGATCTCTCTTACAACAACTTTAGTTGGCAAGGGCCTGAGCAACCTGCTTGTCAGGAAGACATTAGGAACTTAAATGTGAATTTGTTCAGAAGCTCAATGATGAAGAATAAGTTAGAGGAATATGTGCCTTGCAAAAGTAACTTCAATTGTCCACGATATTCAAGTTGCTTACATGTCAATTGTGGTGGAAAGGATATACAAGTAAAAGATAATACAGGAAACACCCTCTATTTCGGAGATGGAGAAGTTGCAGGTGGTACTGCAACATATTTCTATAGCTCCAGTGATCAATGGGGATTTAGTAGCACTGGGGACTTTCTGGATGATTTCGAAGCCCAGAACATACGTTACACTGTATCTTTATCATCTTCAAATATGTCTGAATTGTACACAACAGCACGCATATCTCCAATTTCACTCACTTACTTCCATAATTGCATGGAAAATGGGAACTACACTGTGAATCTTCACTTTGCTGAAATACAGTTTTCAAATGATAACACATATAAAAGCCTTGGGAAGCGTATATTTGATATCTATGTTCAGGAAAAATTGATTAGAAAGGATTTTGATATAGAAAATGAGACACATGCTGCTGTAAAACCACTGGTAGTGCTTATATACAATGTCAGCATCACAAATAATGTTTTGGAGATTAGATTCTACTGGGCTGGGAAAGGAACAACTCGAATACCTGATTATGGAGTTTATGGTCCCCTTGTATCAGCATTGTCTGTTGCTTCTGACTCTAGAACTTGCTCAAACGATGGAAAGAAGGTTCCTGTTTCTGTAATAATTGCAAGTGTAGCTGGGGCTCTATGCTTCATTCTTCTTTTGTTTGGATTCATTTGGTGGAAAGGCTTTTTCAAAAGAAAATTGCGACGGAAAGGTACAAAAGGTGGAGATATTCAGTCAGGAACTTTTAGCTTAGAGCAGCTGAGAGCAGCCACTGATGACTTTTCTTCTGTTAACAAGATTGGAGAAGGCGGTTTCGGTCCTGTATACAAGGGTCAACTGCCTGATGGTACTGTTATAGCAGTTAAGCAACTATCATCAAAGTCAAGGCAAGGAAATCGCGAATTCTTAAATGAAATAGGCTTGATATCTTGTTTGCAACATCCCAACCTTGTAAAGCTTTATGGATACTGCACAGAAGGGGAACAACTTCTATTAGTATATGAGTACCTGGAAAATAATAGTCTTTCCCGTGCTTTATTTGGTAGTGAAACCAATCAGCTTAAGATAGACTGGCCAACAAGGTTTAGGATCTGCATTGGCATAGCAAAGGGTCTAGCATTTCTCCATGAAGAATCAAGATTCAAGATAGTTCACAGAGATATCAAGGCTTCTAATGTGTTACTTGATGGTGAACTAAATCCTAAGATATCTGACTTTGGATTGGCTAAGCTTCATGAAGATGAGAAGACACATATAACTACCCGAGTTGCCGGAACTATCGGATATATGGCACCAGAATATGCACTATGGGGATATCTTACATACAAAGCTGATGTTTACAGCTTTGGAGTCGTGGCCTTAGAAATTGTTAGTGGAAAAAGCAACAACAATTATTTACCAGATGATGAAAGCGTTTGCCTTTTGGATTGGGCATGCCAATTGCACAAAAAACAGAACTTAGTTAAACTGATTGATGAAAGCTTGGGGCCAGAGGACATTATAACAGAAGCAGAAATGGTGGTCAAAGTATCACTACTATGCACAAATGCATCACCATCACTCAGACCTACAATGTCTGAGGTTGTGAATATGCTTGAAGGTCATGCAGCTATTCCGGATATGGTTCCAGATCCAAGTTCCTGCAATGAGGATTTGAGGTTTAAAGCCTTAAGAGACTTCCATCAACATAAATCAAAACAGGGTTTCAGTGTAAACCAGACCCCAAATTCAGCAACACCACATACATTCAGCTCAATATCTGGTGATAATAATTACACAAGTTCTATTGAGGAATTAGCTCATTCTGAGATTTCCCCTTTATCAAGTTAA 3057 0.3912 MQLLNFFGFLLVTLCCFQLLTISESKLPKEEVEALKEITSTMGAVYWEFDNDSCDIIRVGLTREPPDESERSIVCDCSFENNTVCHVTKITLKRLSLPGALPPQLVKLPFLQVIDFAYNCLNGTIPKEWASMNLTSISLLVNRLSGEIPKHVGNITALTYLMLEANNFSGVVPPELGKLINLQTLVLSSNQLTGNLPSALAGLQNLTDFRISSNNFTGTIPDFIKNWQFLQRLEMHGSGLEGPIPSSISLLKNLLQLRISDIKSPSQVFPSLQSMTALTTLVLRNCNLSGEIPSYIWTLTNLATLDVSFNKLVGKIPEVINVKRMRYIYLTGNMLSGNVPKSILKDGSSIDLSYNNFSWQGPEQPACQEDIRNLNVNLFRSSMMKNKLEEYVPCKSNFNCPRYSSCLHVNCGGKDIQVKDNTGNTLYFGDGEVAGGTATYFYSSSDQWGFSSTGDFLDDFEAQNIRYTVSLSSSNMSELYTTARISPISLTYFHNCMENGNYTVNLHFAEIQFSNDNTYKSLGKRIFDIYVQEKLIRKDFDIENETHAAVKPLVVLIYNVSITNNVLEIRFYWAGKGTTRIPDYGVYGPLVSALSVASDSRTCSNDGKKVPVSVIIASVAGALCFILLLFGFIWWKGFFKRKLRRKGTKGGDIQSGTFSLEQLRAATDDFSSVNKIGEGGFGPVYKGQLPDGTVIAVKQLSSKSRQGNREFLNEIGLISCLQHPNLVKLYGYCTEGEQLLLVYEYLENNSLSRALFGSETNQLKIDWPTRFRICIGIAKGLAFLHEESRFKIVHRDIKASNVLLDGELNPKISDFGLAKLHEDEKTHITTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKSNNNYLPDDESVCLLDWACQLHKKQNLVKLIDESLGPEDIITEAEMVVKVSLLCTNASPSLRPTMSEVVNMLEGHAAIPDMVPDPSSCNEDLRFKALRDFHQHKSKQGFSVNQTPNSATPHTFSSISGDNNYTSSIEELAHSEISPLSS 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00274 1018 Gene3D Transferase(Phosphotransferase) domain 1 746 950 - -
Aip10g00274 1018 Gene3D Ribonuclease Inhibitor 201 399 IPR032675 -
Aip10g00274 1018 Pfam Protein tyrosine and serine/threonine kinase 673 941 IPR001245 GO:0004672|GO:0006468
Aip10g00274 1018 Gene3D Ribonuclease Inhibitor 51 200 IPR032675 -
Aip10g00274 1018 SUPERFAMILY Protein kinase-like (PK-like) 655 942 IPR011009 -
Aip10g00274 1018 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
Aip10g00274 1018 SUPERFAMILY L domain-like 82 341 - -
Aip10g00274 1018 Gene3D - 404 601 - -
Aip10g00274 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Aip10g00274 1018 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 986 - -
Aip10g00274 1018 CDD STKc_IRAK 676 943 - -
Aip10g00274 1018 Gene3D Phosphorylase Kinase; domain 1 640 745 - -
Aip10g00274 1018 ProSiteProfiles Protein kinase domain profile. 670 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00274 1018 MobiDBLite consensus disorder prediction 974 999 - -
Aip10g00274 1018 Pfam Malectin domain 406 594 IPR021720 -
Aip10g00274 1018 SMART serkin_6 670 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00274 1018 MobiDBLite consensus disorder prediction 975 999 - -
Aip10g00274 1018 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 71 986 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00274 Aip-Chr10 2896195 2902987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00274 4 836 Receptor kinase-like Gene Family AT1G29750 58.273 0.0 1010
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g00274 PK_Tyr_Ser-Thr 5.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00274 - - qlo:115990047 1374.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00274 10 2896195 2902987 Aip10g00274 10 2896195 2902987 ECH