Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00266 ATGGAGACGAAAAACACTTCGAGGTTTACGCTGATAAAGCAGTCATCAATGGCACCAGAACACCGCAGAGAAGAAGGATCAGAGCTCCACAACGATGGTAGTGGCGAGGAAGGTATCCATCCGGGTGTGAGGTTGATGTATTCGGCGAACGAGAACGATCTTGAGGGTATTCGTGAAGTTTTGGATTCAGGTGTGAGCGTCAATTTCAGAGACATTGATGACCGCACTGCACTTCACGTTGCTGCGTGTCAGGGATTAACCGATGTGGTTTCTTTGTTGCTCGAGAAAGGAGCTGAAGTCGACGCCAAAGATCGCTGGGGGAGCACGCCACTTGCAGATGCTATATTTTATAAAAACAATGATGTGATCAAACTATTGGAGCAGAATGGAGCAAAGCCTTTGATGGCCCCTATGCATGTTCATCATGCACGTGAAGTACCAGAATATGAAATCAATCCTAAAGAACTTGATTTTACCAATAGTGTGGAGATAACAAAGGGCACTTTCTGTAGTGCATTCTGGCGTGGGACAGAGGTTGCAGTAAAAAAACTTGGGGAGGACGTAATTACTGATGAGGAGAAAGTGAAGGCCTTTAGAGATGAGCTTGCACTATTCCTGAAGATCCGGCATCCAAATGTAGTTCAGTTTCTGGGTGCTGTGACACAGAGTAGCCCGATGATGATCGTGACAGAATATCTTCCCAAGGGAGATCTCCGTGCATTCTTGGGAAGAAAAGGAGCTTTGAAACCTTCAACAGCTGTGAAATTTGCACTTGATATTGCCAGGGGAGTGGGTTATTTACATGAGAATAAGCCGTCACCAATCATTCACCGTGATCTAGAGCCTTCCTAA 852 0.4566 METKNTSRFTLIKQSSMAPEHRREEGSELHNDGSGEEGIHPGVRLMYSANENDLEGIREVLDSGVSVNFRDIDDRTALHVAACQGLTDVVSLLLEKGAEVDAKDRWGSTPLADAIFYKNNDVIKLLEQNGAKPLMAPMHVHHAREVPEYEINPKELDFTNSVEITKGTFCSAFWRGTEVAVKKLGEDVITDEEKVKAFRDELALFLKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLGRKGALKPSTAVKFALDIARGVGYLHENKPSPIIHRDLEPS 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00266 283 SMART ANK_2a 37 69 IPR002110 GO:0005515
Aip10g00266 283 SMART ANK_2a 106 135 IPR002110 GO:0005515
Aip10g00266 283 SMART ANK_2a 73 102 IPR002110 GO:0005515
Aip10g00266 283 SMART tyrkin_6 158 283 IPR020635 GO:0004713|GO:0006468
Aip10g00266 283 Gene3D - 5 149 IPR036770 -
Aip10g00266 283 SUPERFAMILY Protein kinase-like (PK-like) 157 283 IPR011009 -
Aip10g00266 283 ProSiteProfiles Ankyrin repeat region circular profile. 73 105 - -
Aip10g00266 283 PIRSF ILK 1 283 - -
Aip10g00266 283 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 283 - -
Aip10g00266 283 ProSiteProfiles Ankyrin repeat profile. 73 105 IPR002110 GO:0005515
Aip10g00266 283 Gene3D Phosphorylase Kinase; domain 1 150 231 - -
Aip10g00266 283 Pfam Ankyrin repeats (3 copies) 45 133 IPR002110 GO:0005515
Aip10g00266 283 MobiDBLite consensus disorder prediction 1 41 - -
Aip10g00266 283 MobiDBLite consensus disorder prediction 17 37 - -
Aip10g00266 283 Gene3D Transferase(Phosphotransferase) domain 1 232 283 - -
Aip10g00266 283 SUPERFAMILY Ankyrin repeat 44 135 IPR036770 -
Aip10g00266 283 Pfam Protein tyrosine and serine/threonine kinase 171 280 IPR001245 GO:0004672|GO:0006468
Aip10g00266 283 ProSiteProfiles Protein kinase domain profile. 158 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00266 283 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00266 Aip-Chr10 2833254 2838097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00266 2 283 MAP Kinase Kinase Kinase AT4G18950 68.198 9.89e-137 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Aip10g00266 PK_Tyr_Ser-Thr 1.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00266 - - gmx:100790126 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00266 10 2833254 2838097 Aip10g00266 10 2833254 2838097 ECH