Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00262 ATGACATCATGGAGGCATTTCAAGAATCATAAAGCCTCCTCCTCAAAAGGACAGCCTCAGTTACCAATTGCTGGTGCTAATAGGCTAACATGGCCACAGAGGAAGAGCATAATTCTTGATGTGGCTAAGGGACTTGCTTATTTGCATTACGAAATCAAACCCCCGATTTATCACTGCGACATTAAAGCGACCAACATACTTCTTGATAGCAAGATGAAAGCAAAAGTGGCGGATTTCGGATTAGCAAAACAGGGCAAGGGTGGCTGGCACATACGGTTATCTAGCGCCAGAGTACTAGACACGACTAATTCGAATTCAAACGTGGTCTTGATCACGGATTGGGCGTGGACGCTCGCAAAATCAGATCGGACGGAAGAGATTCTTGATGAGTCAATAAGGGGAGAAGGGCCAGAGAAGATCATGGAAAGGTTTGTTCTTGTTGGGATTCTTTGCGCTTAG 459 0.4532 MTSWRHFKNHKASSSKGQPQLPIAGANRLTWPQRKSIILDVAKGLAYLHYEIKPPIYHCDIKATNILLDSKMKAKVADFGLAKQGKGGWHIRLSSARVLDTTNSNSNVVLITDWAWTLAKSDRTEEILDESIRGEGPEKIMERFVLVGILCA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00262 152 Gene3D Transferase(Phosphotransferase) domain 1 19 112 - -
Aip10g00262 152 SUPERFAMILY Protein kinase-like (PK-like) 27 91 IPR011009 -
Aip10g00262 152 MobiDBLite consensus disorder prediction 1 21 - -
Aip10g00262 152 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 25 88 - -
Aip10g00262 152 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 93 152 - -
Aip10g00262 152 Pfam Protein kinase domain 32 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00262 152 PANTHER OS01G0253100 PROTEIN 25 88 IPR045271 GO:0004714|GO:0006468
Aip10g00262 152 PANTHER OS01G0253100 PROTEIN 93 152 IPR045271 GO:0004714|GO:0006468
Aip10g00262 152 ProSiteProfiles Protein kinase domain profile. 1 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00262 152 ProSitePatterns Serine/Threonine protein kinases active-site signature. 56 68 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00262 Aip-Chr10 2758865 2759677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00262 29 152 Receptor kinase-like Gene Family AT1G11050 49.405 1.56e-39 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aip10g00262 Pkinase 2.3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00262 - - gmx:100820563 192.2