Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00217 ATGGGTTTCGAAGAACAGGAAGGTGTGTATGACACGAGGATTGAAGCTGAAGAAACTGTAGCTGAATGTGAAGGCAAGGCAGATCCGATTTTTCATGAATTGAACGGGGTGGAAGGTCTCCAAGTAGAAGATATCCTTCAAATGGAGTTTTGTACTCCCGAAGAAGCACGGTGTTTTTATAACAGCTATAGCCGATTGAAGGGATTTGCCACGAGGCAGGGGAAAAAGGTACCGAACAAGGTAGGAGAGATTGTTAGGTATACGTTCGTGTGCAACAGGCAAGGGTTTCGTGATAAAAAATGGTTGGAGATGGCTGATCGAAAGAGGGAACACAAGGTAGTGACTCACTGTGGCTGCTTAGCTGAGATGAGAATTAAGCGAAAAGATGGCAGTGGGAAGTGGTATGTGTCACGGTTTTTGGACAACCATAACCATGAGCTCGTAGCTGGGAAGTATGTTGACTATTTGAGGTCGCATAGGGGGCTATCTGATGTTGAAATTGCTCATCTGACTAGCTTGAGGGAGGTGGGTATAAGCATACCAAAAATATATCAGTCATTTGCCGCACAGGTTGGCGGTTTTAACCTCGTCAGGTTCACTAAGCAAGACATGTATAACGAGGTTAGAAAGCAAAGAAGCTTGCAGAATGGGGATGTTAATGCAGCAGTTCGCTATTTGGAAGGTGTAGCTCGTGTGGATAACAGGATGTACTGGAGGTATACGCTAGGGCAGGACAACAATATGTGCGACCTGTTCTGGAGCGATGGCCGTAGTCAGCTGGATTATGGAATTTTCGGCGATGTTCTTGCATTTGATGCCACATATGGTCGAAACAAGTACAATCTCCTTGTGGTTGTGTTTTCAGGAGTGAACCACCACAATCAAACCTGTATTTTTGGGGCGGCAATGGTATCGTGCGAAACACAAGAGTCCTACATTTGGGTATTAGAAAAGTTTCTGGAATGCATGGAAGGAAAACCCCCAAATGCGGTCATCACGGATGGAGATCCAGCGATGCGCATAGCTATTCACGAGGTCTTTCCCGAGGCCCACCACAGGTTATGTGCATGGCATCTTCTCCGGAACGCCACGTCAAACATATGCGACCCACGCTTCACCCATCTTTTTAGGCAATGCATGCTTGCTGACTTGGAGGTTCATGAGTTTGAGGCACATTGGGATGCTATGTTGGATGAATGTGGGGTAAGGGAAGTCGATTGGGTTAAGGACCTCTACCGGCGAAAGCATGCTTGGGCGACTGCGTACATCAGAGGCCGCTTTTTTGCTGGTATACGCACAACGTCTCGCTGCGAGTCACTTCACGCGAAGCTTGGTAGGTTTGTGGAGAGTAGGTATGGCATACTTGAATTTGTGACAAACTTCCAAAGGTGCATAGATTTTTTGCATGATAATGAGGATGAGCTTGATTTTCGTTCCTCGTACGGGACCCCAGTGTTACAAACTGAATTTGTTGAGCTTGAGAAGTCGGGTTGGACAAAGTACACCCGTAAAATGTTCTTCAGATATCGGGAAACTCTTAGGAGATGTGTTCGAGTTAAGATTTGCCACTGCGATGTTAGTGATAGCGGAGAAGTGTACATCCTTCAAAAATATAGAAGGCCCGAGCAAACCTGGGAGGTTAGCTGTTTTGGTCGGGTAGCATGTCTCAGCGATGACGACTTCAAGGATTACTCGAAGAAGATACTCAGTGATGCCCTCCGACTGGAGATGAAGCACGGGCTAAGAACAGCGGAGGAAACCGTTGTTTCCGTGTCCGATGTTGGCATGAAGGACCCCATTCATGTGAGAACTAAGGGCACCCGTCGTTTAAGCCAGCCGTCGGCAACAATGGGAAAGAAACATCATAAATGTAGTACCTGCGGATGA 1887 0.4685 MGFEEQEGVYDTRIEAEETVAECEGKADPIFHELNGVEGLQVEDILQMEFCTPEEARCFYNSYSRLKGFATRQGKKVPNKVGEIVRYTFVCNRQGFRDKKWLEMADRKREHKVVTHCGCLAEMRIKRKDGSGKWYVSRFLDNHNHELVAGKYVDYLRSHRGLSDVEIAHLTSLREVGISIPKIYQSFAAQVGGFNLVRFTKQDMYNEVRKQRSLQNGDVNAAVRYLEGVARVDNRMYWRYTLGQDNNMCDLFWSDGRSQLDYGIFGDVLAFDATYGRNKYNLLVVVFSGVNHHNQTCIFGAAMVSCETQESYIWVLEKFLECMEGKPPNAVITDGDPAMRIAIHEVFPEAHHRLCAWHLLRNATSNICDPRFTHLFRQCMLADLEVHEFEAHWDAMLDECGVREVDWVKDLYRRKHAWATAYIRGRFFAGIRTTSRCESLHAKLGRFVESRYGILEFVTNFQRCIDFLHDNEDELDFRSSYGTPVLQTEFVELEKSGWTKYTRKMFFRYRETLRRCVRVKICHCDVSDSGEVYILQKYRRPEQTWEVSCFGRVACLSDDDFKDYSKKILSDALRLEMKHGLRTAEETVVSVSDVGMKDPIHVRTKGTRRLSQPSATMGKKHHKCSTCG 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00217 628 Pfam MULE transposase domain 268 362 IPR018289 -
Aip10g00217 628 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 43 531 IPR031052 GO:0006355
Aip10g00217 628 Pfam FAR1 DNA-binding domain 59 148 IPR004330 -
Aip10g00217 628 PANTHER OS02G0262500 PROTEIN 43 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00217 Aip-Chr10 2109431 2111801 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g00217 MULE 1.4e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00217 - - aip:107620408 880.552