Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00193 ATGGTAGATAGTGGTTTTGGTGGTGGTCGTGATTCTGGGATGAGCTTGGAGACTGTGAATTCTGCACAGAGAACTTCCATGAGCAGCGACAGCATCTGCGCCGGTGACATCGGCACCGTCTACCTCTGCCGCCTCCGTGACTCAGCCGCCGCCTCCGATGAGTTCCCCTCCGGTGAGTACGACAACTCCAACAGCAACGGCAACGATGAACCAGCCGGGTGCTTCTACGCGATGAAGGTTGTGGACAAGGAGGCGGTGGCGATGAAGAACAAGTCGCAGAGGGCCGAAATGGAGAGGAAGATCCTAAAGATGTTGGACCATCCGTTCCTTCCTACCCTGTATGCGGAGTTTGAAGCGTCTCATTTCTCTTGCATTGTGATGGAGTTTTGTCCCGGCGGCGACCTCCACTCCCTCCGCCACAAGCAACCACACAAACGGTTCCCTCTCTCCTCCGCAAGGTTTTACGCTGCGGAGGTACTGGTTGCTTTGGAATACCTGCACATGCTTGGAATCATCTACAGGGATCTAAAGCCCGAAAACGTGTTGAAAACACATTCCCGCTACCATACACAAACACACGCACCNNNNNNNNNNNNNNCGCTCAACCCCAAGCGCCTCTTCGTGGCCGAGCCTGTCGGAGCACGCTCCTGCTCCTTCGTCGGAACTCACGAGTACGTGTCGCCAGAGGTTGCCTCCGGGAATTCCCACGGAAATGCCGTTGACTGGTGGTCTTTCGGGATATTCGTGTACGAGCTCGTGTATGGTCGCACACCGTTTGCTGGTCCATCCAACGATGTGACACTGCGCAACATCATAAAGAAGCCATTGGCGTTTCCTACAGCCACGTCCTGCAGCACGCTTGAGCACCACGTCTGGGACCTCATAAGTGGCTTGCTCCACAAGGACCCCACTCGAAGACTCGGGTCCAGGCGGGGCGCTGCTGACGTCAAAAAGCACCCCTTCTTCAGCGGGATCAACCTGGCGCTCATCAGGATGCTCACTCCGCCGGAGATTCCCTATCTCAGGGGGCAAAAAACGATGCCTTCTTCGTTGTTCTCTGCTACTACTAAAGGCCACAACACCATAATGAGTAATAAGCAGCTGCAAACAACGGCGTCGTTTGATTGCTTTTGA 1134 0.5432 MVDSGFGGGRDSGMSLETVNSAQRTSMSSDSICAGDIGTVYLCRLRDSAAASDEFPSGEYDNSNSNGNDEPAGCFYAMKVVDKEAVAMKNKSQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCPGGDLHSLRHKQPHKRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLKTHSRYHTQTHAXXXXXXLNPKRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFVYELVYGRTPFAGPSNDVTLRNIIKKPLAFPTATSCSTLEHHVWDLISGLLHKDPTRRLGSRRGAADVKKHPFFSGINLALIRMLTPPEIPYLRGQKTMPSSLFSATTKGHNTIMSNKQLQTTASFDCF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00193 377 Gene3D Phosphorylase Kinase; domain 1 71 345 - -
Aip10g00193 377 SMART serkin_6 26 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00193 377 PANTHER FLIPPASE KINASE 1-RELATED 32 183 - -
Aip10g00193 377 PANTHER FLIPPASE KINASE 1-RELATED 200 377 - -
Aip10g00193 377 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 32 183 - -
Aip10g00193 377 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 200 377 - -
Aip10g00193 377 SUPERFAMILY Protein kinase-like (PK-like) 32 355 IPR011009 -
Aip10g00193 377 Pfam Protein kinase domain 70 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00193 377 Gene3D Transferase(Phosphotransferase) domain 1 134 340 - -
Aip10g00193 377 ProSiteProfiles Protein kinase domain profile. 26 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00193 377 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00193 Aip-Chr10 1864273 1865974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00193 32 377 AGC Kinase Gene Family AT2G34650 57.474 4.30e-149 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aip10g00193 Pkinase 2.9e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00193 10 1864273 1865974 Aip10g00193 10 1864273 1865974 ECH