Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00192 ATGTGTGCTTACAAGGCTTATGACCGCATGGCTGATATCAATGGAAAGTCGATGGACAACAACATACGATTCACTCTGGTGAACATGAGTGGAAATCGATGGCTTGCAATTCGATTGGAAACTCTGGGAGGTCTCATGATATGGTTTACTGCAACCTTTGCGGTAATGCAGAATGGGAGGGCCGAGAACCAGCAGCAATTTTCATCCACCATGGGTTTCCTACTTAGTTATGCTTTGAACATTACCAGTTTGCTTACTGGTGTGCTCAGGCTTGCTAGTTTGGCTGAGAATAGTCTAAATGCTGTTGAGAGTGTTGGCACTTATATAGATTTGCCTTCAGAGGCACCATCCATCATTGAGGATACTGATTTGCGTAAAGTTCTTGGCATTATACCACAGTCCCCTGTTTTGTTTTCAGGAACGGTAAAGTTTAATCTTGACCCTTTTAATGAACACAATGATGCTGACCTCTGGGAGGCTCTGGAGAGGGCACATTTGAAGGATGTGATTCGGAGGAATTCTTTGGGGCTGGATGCTGAGGTCTCTGAGGCAGGCGATAACTTCAGTGTTGGGCAGAGGCAACTGTTGAGTCTCTCTCGGGCATTATTGCGTAGATCAAAGATATTAGTACTTGACAAAGCCACTGCAGCAGTAGATGTTAGAACAGATGCCCTCATACAGAAAACAATTCGAGAGGAATTTAAATCGTGCACCATGCTCATCATTGCTCATTGTCTTAACACCATCATAGACTGTGATCGGATTCTTTTGCTCGATGGTGGTAAGGTTCTTGAATATGATACCCCTGAAGAACTGCTATCAAATGAAGGCAGTTCGTTCTCTAAGATGGTGCAAAGTACAGGAGCCGCAAATGCCCAATATCTACGCAGCTTAGCACTCGGGAGTAAGTCAGATAGGGAAGAGAGTAAGCATAATGATGGCCAGAAAAAATGGCTTGCTTCGTCTCGCTGGGCTGCTGCAGCTCAATTTGCCCTTGCCACCGATACCAAATATCCTCACAGTTGGTGGTCATCACTCTACAGGATGATTGAAGGTCTTGCAATGATGAGCAGACTGGCCACATCAATCAGACTTTGA 1098 0.449 MCAYKAYDRMADINGKSMDNNIRFTLVNMSGNRWLAIRLETLGGLMIWFTATFAVMQNGRAENQQQFSSTMGFLLSYALNITSLLTGVLRLASLAENSLNAVESVGTYIDLPSEAPSIIEDTDLRKVLGIIPQSPVLFSGTVKFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGDNFSVGQRQLLSLSRALLRRSKILVLDKATAAVDVRTDALIQKTIREEFKSCTMLIIAHCLNTIIDCDRILLLDGGKVLEYDTPEELLSNEGSSFSKMVQSTGAANAQYLRSLALGSKSDREESKHNDGQKKWLASSRWAAAAQFALATDTKYPHSWWSSLYRMIEGLAMMSRLATSIRL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00192 365 PANTHER ABC TRANSPORTER C FAMILY MEMBER 1 123 319 - -
Aip10g00192 365 PANTHER ABC TRANSPORTER C FAMILY MEMBER 1 2 121 - -
Aip10g00192 365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 277 IPR027417 -
Aip10g00192 365 ProSitePatterns ABC transporters family signature. 188 202 IPR017871 GO:0005524
Aip10g00192 365 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 285 IPR003439 GO:0005524
Aip10g00192 365 Pfam ABC transporter 119 216 IPR003439 GO:0005524
Aip10g00192 365 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 123 319 - -
Aip10g00192 365 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 121 - -
Aip10g00192 365 Gene3D - 82 287 IPR027417 -
Aip10g00192 365 SUPERFAMILY ABC transporter transmembrane region 3 116 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00192 Aip-Chr10 1835006 1837667 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00192 124 291 Calmodulin-binding Proteins AT2G36910 34.884 5.28e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00192 - - gmx:100795004 370.933