Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00181 ATGCGGAGAAATTGCAACTTGGAACTTGGGCTCTTTCCTCCCTATGATTCCGGGAGCCCAAAGCAAGAAGAAAGGCAAAGCCAGCCACGCCAGATTACAATTTTCTATGACGGAAAGATTTGTGTTTCTGATGTCACAGAGCTTCAGGCCAAATCAATCTTAATGCTTGCAAATAAAAAAGCCAATATTATTAGGACACCAACAACGGTATCATCATCATCGGAGCCATCTTCATCCTCGTCGCCGCCGCCACCACCACCATTATTGAATAGTAATAATCAACAAGTGTATAACACTACTACTGCTGGCACTGGACTTTCCATGAAAAGATCGCTGCAAAGGTTCCTACAGAAGAGAAAGAATCGAATCCAAGAAGCTTCCCCTTACCACCATCACTAG 399 0.4386 MRRNCNLELGLFPPYDSGSPKQEERQSQPRQITIFYDGKICVSDVTELQAKSILMLANKKANIIRTPTTVSSSSEPSSSSSPPPPPPLLNSNNQQVYNTTTAGTGLSMKRSLQRFLQKRKNRIQEASPYHHH 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00181 132 Pfam Jas motif 109 129 IPR018467 -
Aip10g00181 132 SMART tify_2 25 59 IPR010399 -
Aip10g00181 132 MobiDBLite consensus disorder prediction 67 108 - -
Aip10g00181 132 PANTHER - 1 131 - -
Aip10g00181 132 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 131 IPR040390 -
Aip10g00181 132 MobiDBLite consensus disorder prediction 91 108 - -
Aip10g00181 132 Pfam tify domain 27 58 IPR010399 -
Aip10g00181 132 MobiDBLite consensus disorder prediction 1 29 - -
Aip10g00181 132 ProSiteProfiles Tify domain profile. 25 59 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00181 Aip-Chr10 1705526 1708156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00181 1 130 Tify Gene Family AT1G30135 38.356 6.95e-21 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aip10g00181 tify 5.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00181 - - gmx:100803886 134.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00181 10 1705526 1708156 Aip10g00181 10 1705526 1708156 ECH