Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00178 ATGGGAGATGGAAGAGGAAGTAGTGCAATGATTGGTGTAATGCTACTGTTGTGTATGTCAGTGACTTATGCACTAAGATACAAGGTTGGGGATTCACGTGGTTGGTCCTTCAACGTTAGTAACTGGCCTTATGGAAAGACTTTCATGGCTGGTGATGTACTTGAATTCAATTACATGTTTGGAATGCACAACGTGATGGAAGTAGACAAGTCCTTTTTCGAGCTATGCATTCCAATTCCAAAGATCGGAAGGGAATTTGGAGAGACAGTGCACTGGTCAGGAAATGATCAAATTCAGCTTCGCTCAGGACAGAGCTACTTCATTTGTAGTTTTCTTGGTCATTGTCAGCGTGGCATGAAAATTGCCGTCAATGCTGTCTAA 381 0.4252 MGDGRGSSAMIGVMLLLCMSVTYALRYKVGDSRGWSFNVSNWPYGKTFMAGDVLEFNYMFGMHNVMEVDKSFFELCIPIPKIGREFGETVHWSGNDQIQLRSGQSYFICSFLGHCQRGMKIAVNAV 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00178 126 CDD Plantacyanin 27 125 IPR041844 -
Aip10g00178 126 PANTHER BLUE COPPER PROTEIN 7 124 IPR039391 GO:0009055
Aip10g00178 126 Pfam Plastocyanin-like domain 38 119 IPR003245 GO:0009055
Aip10g00178 126 SUPERFAMILY Cupredoxins 27 125 IPR008972 -
Aip10g00178 126 PANTHER BASIC BLUE-LIKE PROTEIN 7 124 - -
Aip10g00178 126 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055
Aip10g00178 126 Gene3D - 25 126 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00178 Aip-Chr10 1695562 1696088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00178 13 126 Phytocyanin Superfamily AT1G17800 37.903 2.30e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00178 - - ahf:112714333 255.758