Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00170 ATGGGGTTTGAATCCTTTGAAACTAAGTGTTGCACGTGGGGTTTGGAGAGTGATAGTTCTGAGTCTGGTGTTTCAATTGAATTGGGTTGTGCTTGTAAAGATGATTTTGTTGCTGCTCACAAAGTATGTGCTGAGACATGGTTTAAGATTAAGGGGAATTTGAACACCCTTTTGTTTATGATTCATGGAATTGAGAATTGGATTGTTTGcttctctgcgcttctttcggcaccaatctcaatttgtttgaatcacactccctttgccttctctgtgCTTGAGCTCCAAGCACCAAGAGGAACCTCACAGATCAATGTTTGCTTCGATGTAAACATCGATGGCATTCTTGAGGTCACGGCTGAAGACAAAAGTTCGAGGGTGAAGAAAACGATCAAGATCAACCACAGGAATGGAAGGTTGAGACCAGAAGAGTTGAAGAGAATGGTGAGAGATACAGAGAAGTTTAAGGAAGATGATGAGGAAGTAAAGAAGAAGGAGAAGGCAAAGAACTCGCTTGAAAACTATGCATATGAAATGAAGAGTCCAAGGTTCCAATATGGTGTACTTGGAGGGTTCCACCAAGTGGTTGGGTTTGTCTCAATTGATGATATTCTAGATGTTGATGGCCTCATCTTTTATATTGAGCGGGAATAA 654 0.3654 MGFESFETKCCTWGLESDSSESGVSIELGCACKDDFVAAHKVCAETWFKIKGNLNTLLFMIHGIENWIVCFSALLSAPISICLNHTPFAFSVLELQAPRGTSQINVCFDVNIDGILEVTAEDKSSRVKKTIKINHRNGRLRPEELKRMVRDTEKFKEDDEEVKKKEKAKNSLENYAYEMKSPRFQYGVLGGFHQVVGFVSIDDILDVDGLIFYIERE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00170 217 PANTHER HEAT SHOCK PROTEIN 70KDA 96 181 IPR013126 GO:0005524|GO:0140662
Aip10g00170 217 Pfam Hsp70 protein 90 181 IPR013126 GO:0005524|GO:0140662
Aip10g00170 217 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 86 185 IPR029047 -
Aip10g00170 217 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 96 181 - -
Aip10g00170 217 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 97 173 IPR029047 -
Aip10g00170 217 SMART ringv_2 11 55 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00170 Aip-Chr10 1623588 1628740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00170 97 181 Calmodulin-binding Proteins AT1G16030 60.000 2.34e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00170 K03283 - ahf:112718411 141.739