Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00168 ATGTCGCTTTCCTGTGCCAAGAACTTCTTCCAGAGGTTCTGGATGGATGAATTCCAAATGCCAAGTTTCTCACACAGCAGCTTCTTGAACAATGACCTCTTACCATCTCTTGGAGCAAGAATAAACCAGGAAACTCGCCTTCGAAAATACATAGTTTCGCCTTTCGACCCACGTTATAGGGCTTGGGAGATGTTACTGGTTGTTCTAGTGGTTTACTCAGCCTGGATTTGTCCCTTTGAGTTCGCGTTTCTGACTTACAAGCAAGACACGCTATTCATCATAGATAACATAGTGAATGGCTTCTTCGCAGTTGACATCGTCCTCACATTCTTCGTGGCCTACTTAGACAGCCACTCATATCTTCTGGTTGATGATCCAAAGAAAATTGCAATCAGGTACATATCTACCTGGTTTGCCTTTGATGTATGCTCCACAGCACCATTCCAGCCAATCACCCTCCTCTTCACAAACCACAGCAGTGAGATTGGTTTCAAAGTCCTTAACATGCTTCGATTATGGAGGCTCAGACGAGTCAGCTCTCTTTTTGCCAGACTCGAAAAGGACATTCGCTTCAACTACTTCTGGACAAGGTGCACAAAGCTTATTGCTGTAACATTGTTCGCAGTACATTGTGCCGGCTGCTTCAACTATCTGATTGCAGATAAGTACCCGGATTCAAAGAGAACCTGGATTGGCGCCACGTACCCGGATTTCAAAGAAGAAAGCCTCTGGGACAGATATGTGACTGCAATGTACTGGTCCATTGTCACTCTTACAACCACCGGCTATGGAGATTTGCATGCAGAGAACACCAGAGAGATGCTGTTTGATATCTTCTACATGCTCTTCAACTTGGGTTTAACATCATACATCATTGGAAACATGACCAACCTAGTTGTTCACTGGACCAGCCGCACCAGAAACTTCAGAGATACAGTGAGAGCAGCCACTGAGTTCGCTTCCAGAAACCATCTTCCACCACGGATACAGGATCAGATGTTGTCACACATATGCTTGAAGTTCAAGACAGAAGCATTGAAGCAGCAAGAAACACTGAATGATCTGCCAAGGGCGATTCGTTCAAGCATTGCACACCATCTGTTCTTTCCAGTTGTGCAAAGGGTCTACCTCTTCAAAGGAGTCTCCCATGACTTCCTTTTCCAACTGGTTTCAGAAATGGAAGCTGAGTATTTCCCACCCAGGGAAGATGTGGTACTGCAAACCGAATCATCTACAGACTTGTACGTTCTGGTTTCAGGGGCAGTGGATCTTGTTCAATACGTGGATGGCCAAGAACAACTCTTTAGGAAAGTATTTGCAGTAGATACGTTTGGTGAGATTGGTGCATTATATCATGTACCTCAGCCTTTCACAGTTCGGACCACAGAGCTTTCTCAAATTCTAAGACTCAACAGAACATCACTCACCAATGTTTTGCATGCAAATCCCAGAGATGCACAGATCATAACGGATAACCTCTTCATGAGGTCAAAGGGGCATCAAGAGCCAGGCTTGGAATATCCGAGTGCGGATCCTAGATTGTTTCTTCAGAAACTGCTTCACGGAGGCAACAAAAGAGGCAGATTTTCCCGCACATGTACGGCTTCTGAGGCCAATTTGCAGGATGATCATCATTCAATCAGTGCTGAAGATGGCAAAAGAGATGATCAAGACATGGTTGAAATTCTGCTTGAGAGAGACGCAAATGCAAATACCCCAAAAGTTCCAGTGCAACAGCTCAAAAGCAAGAGCATCTCTGACCAAATAGTGACTTGTGAAAAAGAGATGAAATCTTCAGGAGAATATAGAATACAGGTTGTGGAGCCAGAAATACTTAACCTTGATAGGAATGACTCAACCATGAACAAAAGTAAAGATGCTTCTGGGTTCATGAAGAAGAGAGTCACAATCCACTTGCTAAGCGGGTGCAAAACTAACCCACAGGGACAGTACGGAAAGTTGATCATCCTTCCTGAATCATTGGAAGAGCTGCTCAACATTGCTGGTGAAAAATTTGGAGGCTTGAAACCTACAAAAGTAATTAATGAAAAGAATGCAGAGATAGACGACACAAACGTCATTAGAGATGGGGATCATCTCTTCTTTCTTTGTAGTGATAGTGAAAATTTGACATTATGA 2139 0.4376 MSLSCAKNFFQRFWMDEFQMPSFSHSSFLNNDLLPSLGARINQETRLRKYIVSPFDPRYRAWEMLLVVLVVYSAWICPFEFAFLTYKQDTLFIIDNIVNGFFAVDIVLTFFVAYLDSHSYLLVDDPKKIAIRYISTWFAFDVCSTAPFQPITLLFTNHSSEIGFKVLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLIAVTLFAVHCAGCFNYLIADKYPDSKRTWIGATYPDFKEESLWDRYVTAMYWSIVTLTTTGYGDLHAENTREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVRAATEFASRNHLPPRIQDQMLSHICLKFKTEALKQQETLNDLPRAIRSSIAHHLFFPVVQRVYLFKGVSHDFLFQLVSEMEAEYFPPREDVVLQTESSTDLYVLVSGAVDLVQYVDGQEQLFRKVFAVDTFGEIGALYHVPQPFTVRTTELSQILRLNRTSLTNVLHANPRDAQIITDNLFMRSKGHQEPGLEYPSADPRLFLQKLLHGGNKRGRFSRTCTASEANLQDDHHSISAEDGKRDDQDMVEILLERDANANTPKVPVQQLKSKSISDQIVTCEKEMKSSGEYRIQVVEPEILNLDRNDSTMNKSKDASGFMKKRVTIHLLSGCKTNPQGQYGKLIILPESLEELLNIAGEKFGGLKPTKVINEKNAEIDDTNVIRDGDHLFFLCSDSENLTL 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00168 712 SUPERFAMILY Voltage-gated potassium channels 54 300 - -
Aip10g00168 712 PANTHER POTASSIUM CHANNEL AKT1 551 626 IPR045319 GO:0005249|GO:0006813
Aip10g00168 712 PANTHER POTASSIUM CHANNEL AKT1 1 538 IPR045319 GO:0005249|GO:0006813
Aip10g00168 712 PANTHER POTASSIUM CHANNEL AKT1 626 711 IPR045319 GO:0005249|GO:0006813
Aip10g00168 712 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Aip10g00168 712 CDD CAP_ED 377 489 IPR000595 -
Aip10g00168 712 ProSiteProfiles KHA domain profile. 634 712 IPR021789 -
Aip10g00168 712 Pfam KHA, dimerisation domain of potassium ion channel 633 702 IPR021789 -
Aip10g00168 712 Pfam Cyclic nucleotide-binding domain 397 480 IPR000595 -
Aip10g00168 712 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 551 626 - -
Aip10g00168 712 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 626 711 - -
Aip10g00168 712 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 538 - -
Aip10g00168 712 SUPERFAMILY cAMP-binding domain-like 304 493 IPR018490 -
Aip10g00168 712 Gene3D Jelly Rolls 344 503 IPR014710 -
Aip10g00168 712 SMART cnmp_10 377 494 IPR000595 -
Aip10g00168 712 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aip10g00168 712 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip10g00168 712 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip10g00168 712 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip10g00168 712 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip10g00168 712 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip10g00168 712 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip10g00168 712 Gene3D - 60 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00168 Aip-Chr10 1616744 1619684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00168 1 702 Ion Channels AT5G46240 61.396 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00168 K21867 - gmx:100783528 1051.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00168 10 1616744 1619684 Aip10g00168 10 1616744 1619684 ECH