Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00166 ATGATCAAGAAGGATCGGAGGCAAAGGATGTCCGTGTTGCTGTGCCTTTCTTGTCAAATGATCATCAAGAAAATCAGTCACACAAGTAGTGCCAGCAGCTGTGGAAGTGCCGGAAGTTGTGCTGTCAATAATAAAGTGGATGTGGACAGTGATTGCTTGGATTATGAAATTTTGTGGGAAGAACTGACTATTGGAGAACAAATTGGACAAGGTTCCTGTGGAACTGTATATCATGCTCTGTGGTATGGATTAGAACCCACTATAAGTCCTGTTTTTTGCAAACGAGATGGGAAGGTAATAGCAGACTACTATGTCATAGTGATATGTGTACCCAAAAAGGCACTATACAAGTTCATGCAGCAGCTGAGAGCGATTGATGACAGTAACGTTCTTATATCACCCTTGACCTACATTTTTTATGAGGAAACACCAAGATGGCGCTAG 444 0.4189 MIKKDRRQRMSVLLCLSCQMIIKKISHTSSASSCGSAGSCAVNNKVDVDSDCLDYEILWEELTIGEQIGQGSCGTVYHALWYGLEPTISPVFCKRDGKVIADYYVIVICVPKKALYKFMQQLRAIDDSNVLISPLTYIFYEETPRWR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00166 147 Gene3D Phosphorylase Kinase; domain 1 51 125 - -
Aip10g00166 147 Pfam HisG, C-terminal domain 85 137 IPR013115 GO:0000105|GO:0000287|GO:0003879|GO:0005737
Aip10g00166 147 PANTHER ATP PHOSPHORIBOSYLTRANSFERASE ATP-PRTASE 85 146 IPR001348 GO:0000105|GO:0003879
Aip10g00166 147 PANTHER ATP PHOSPHORIBOSYLTRANSFERASE 1, CHLOROPLASTIC 85 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00166 Aip-Chr10 1579443 1581173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00166 42 96 MAP Kinase Kinase Kinase AT5G49470 72.727 3.34e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00166 K00765 - pvu:PHAVU_003G114400g 115.546