Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00150 ATGTGGAAAATTTGTCACTCTCCTTTTGAAAAAAAACCTTTGTTGCTCAATGGATTCTCGGAACATCACAATTGGAGAGCTTCAGTTGATTGGGTCACCCCTCTTGGCCACCCCAATTTTCAATTTTTCTCCACAAATTTTGGGGATTCCAAAGTTCAGGTTGCAGATTGTGACACAAGAGAGTTCACCGATCAGAAAAGGGAGGAGATGCTGGTTTCGGATTTTATAGGACGTTGCCTTCAAGATGTTGAAGGTTCTGCAGTCCAATCTAGCAATAGTCACTCTGTACCGTATTTGAAGGATTGGCATTTTGTAAAGGAGTATCCAGAATATGTAGCATATAAAACTCCAATGTTCTTTTGTGATGATTGGCTTAACCTGTATCTTGACAACTACAGAATGCATACTGATTCTGACACATACCAAGAAAATAACGAAATATGTTGCTCTGACTATCGTTTTGTATACATGGGAGTTAAAGGATCTTGGACTCCTCTTCATGCCGATGTTTTCCGGTCATATAGCTGGTCGGCAAATGTTTGTGGAAAAAAGAGATGGCTTTTTCTAGATCCTTCCCAACATCATCTTGTATTTGACAGGAATATGAAAAATTGTGTATATAATATCTTTGATGAAGTATCTGACTCAAAATTTCCTGGTTTCAAAAAGGCTATCTGGTTAGAATGCATGCAAGAAGCAGGTGAAATTATATTTGTTCCCAGTGGATGGTACCATCAAGTTCATAATTTGGAGGATACAATATCTATAAACCACAACTGGTTCAATGCGTATAACCTTTCATGGGTGTGGAATTTACTTTTGAGGGACTACAATGAGGCCATCGAATACATAGAAGACATCAAGGATGTATGTGAGGATTTCGAAGGTCTTTGCCAGCGCAATCTTGCTGCTAACACGGGGATGAACTTTTATGACTTCTTTGCTTTCATATCACGCTTCACCTTGGCCAACATTGTCTTGCTTTGTTATATAAATGGAAGACATGGAAATATCACTCAAATCTCATCAACAATAGCTCGGCATTTATTGATGAATCTTGGATCCATAAGGAAGGTTGCATCGGAGATGAAAGACAGGCATGCTCTAAAAGGAAATCAGGATCGCGCTGTGGACATTATAGAAACACTTGAAGATCCTAGGTTTTGCAAACTGTGCATGGATATTGGAAGAACATATGCAATGATACATGAAGAGTCTCATTTGTCCTTTGATTTCGAGAGCGCTTCGGCTGGTGAAATAGCGGATCTCACTGTTTTGAAAGCATACACTTCATCTCAGTTCTACACACCTGAAGATCTTGTTGAATTTATAGACAATGCTGTTGCAGAACATGAAACCAATGCTTCCTTGATGTCAAGCTCTCAATGTTTCTGTAATGAGAGAGAGAAAAAGAGTTGTTTGGTGAAGTCCTAG 1434 0.3905 MWKICHSPFEKKPLLLNGFSEHHNWRASVDWVTPLGHPNFQFFSTNFGDSKVQVADCDTREFTDQKREEMLVSDFIGRCLQDVEGSAVQSSNSHSVPYLKDWHFVKEYPEYVAYKTPMFFCDDWLNLYLDNYRMHTDSDTYQENNEICCSDYRFVYMGVKGSWTPLHADVFRSYSWSANVCGKKRWLFLDPSQHHLVFDRNMKNCVYNIFDEVSDSKFPGFKKAIWLECMQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLRDYNEAIEYIEDIKDVCEDFEGLCQRNLAANTGMNFYDFFAFISRFTLANIVLLCYINGRHGNITQISSTIARHLLMNLGSIRKVASEMKDRHALKGNQDRAVDIIETLEDPRFCKLCMDIGRTYAMIHEESHLSFDFESASAGEIADLTVLKAYTSSQFYTPEDLVEFIDNAVAEHETNASLMSSSQCFCNEREKKSCLVKS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00150 477 Pfam Cupin-like domain 11 260 IPR041667 -
Aip10g00150 477 Gene3D Cupin 6 261 - -
Aip10g00150 477 SUPERFAMILY Clavaminate synthase-like 11 289 - -
Aip10g00150 477 ProSiteProfiles JmjC domain profile. 105 277 IPR003347 -
Aip10g00150 477 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE JMJD4 12 451 - -
Aip10g00150 477 SMART cupin_9 97 277 IPR003347 -
Aip10g00150 477 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 12 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00150 Aip-Chr10 1356204 1360406 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00150 11 269 Glycosyltransferase AT1G78280 22.263 2.68e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aip10g00150 Cupin_8 3.7e-18 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00150 - - aip:107632417 868.996