Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00131 ATGAGTAGCTTACAATGGAAAAAACTGAAAGTCTTGGGAGTGGGTTCTTATGGCACTGTTTATCTTGCAATTGTTGTTGATACACAAACATCGTATCAGAGCTTCATTGCTGAGAAGAGCTCCATTCCCAGGTTGGCATTCTCACTGAAGAAAGAAGAACAGATTTTCAAATCATTAGGTACGCTATTGTACTTGTCGCCGGAGACATTTTCCGGTCATATTGATGCTCCGATCGATATATGGGCACTTGGTTGCATAGTGATTGAAATGTTGACTGGATTGCTTGCATGGGGTGAGAGATTTTTGCGTACTGAAGAGTATTTGAGGTTCTTCGTTGAGTATCTTGAACTATCACCCAAGAAGCCGAAAGGAATCAATGTTTTCTGTTATGATTTTCTGGAAAAAGTGCTTTATGAAGGATCCTAG 426 0.4014 MSSLQWKKLKVLGVGSYGTVYLAIVVDTQTSYQSFIAEKSSIPRLAFSLKKEEQIFKSLGTLLYLSPETFSGHIDAPIDIWALGCIVIEMLTGLLAWGERFLRTEEYLRFFVEYLELSPKKPKGINVFCYDFLEKVLYEGS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00131 141 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00131 141 SMART serkin_6 6 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00131 141 Pfam Protein kinase domain 48 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00131 141 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 60 135 - -
Aip10g00131 141 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 59 - -
Aip10g00131 141 Gene3D Transferase(Phosphotransferase) domain 1 23 139 - -
Aip10g00131 141 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 60 135 - -
Aip10g00131 141 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 59 - -
Aip10g00131 141 SUPERFAMILY Protein kinase-like (PK-like) 54 137 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00131 Aip-Chr10 1178913 1179707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00131 26 137 MAP Kinase Kinase Kinase AT1G07150 27.966 9.45e-09 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip10g00131 Pkinase 8.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00131 - - adu:107463458 140.969