Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00130 ATGATTGTTAAAGGGTTTTTGCATATTCATCGCAAAGGAATCGTCCACTGTAACCTCAATTCGGAGAACATTCTTCTGTTTCCTTCATTGGAGAAAGAGAGTGCATACTATCAATTGAAGATTGCGGATTTCAAATTATCTAAGACCAAAGAGGAGGAAGCAGAGTTTGAGGTTTGGAAGTCCAAGACTAGAGGGCCTGATGGCTATGCTGTAGGGTCTCTTGGGTCAGGCCGTCTTCTTCTCTTTGATGGCTTTGCCGAAAGAGAGTTGGAGTCAGGCGGTGTTAGGAAATAG 294 0.4354 MIVKGFLHIHRKGIVHCNLNSENILLFPSLEKESAYYQLKIADFKLSKTKEEEAEFEVWKSKTRGPDGYAVGSLGSGRLLLFDGFAERELESGGVRK 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00130 97 Gene3D Transferase(Phosphotransferase) domain 1 1 78 - -
Aip10g00130 97 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 67 - -
Aip10g00130 97 SUPERFAMILY Protein kinase-like (PK-like) 2 69 IPR011009 -
Aip10g00130 97 ProSiteProfiles Protein kinase domain profile. 1 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00130 97 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00130 Aip-Chr10 1177490 1178187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00130 2 58 MAP Kinase Kinase Kinase AT4G36950 38.596 4.14e-07 44.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip10g00130 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00130 - - aip:107607793 131.724