Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00125 ATGGAATCTCACATCTATGTGCTGCATGTTAATCCTGATTCTGGCTTATCAATTTTTGATATTGCTAACAAGCATGGAATGATTAGTAGTGGCTATGTGTGGATTGCAACAGTTAATGATGACACAATCAAGCTCCTGCAAGGTGTTGTTGCTTTGAGGAATCACACACCTGATACTGATTTCAAGAAGAGTTTCATCTCCCGCAATCAACTTGTTCTGCGACAATATATACTCCATGGAGATGGTGATGGTGATAGTGATCCAGATTACAGTAAGCTTGTGAATCAGGCATTCCAGAGGGATTTTCCTCTTGCTGATGATTTATCAGCTGCAATTCTTCGATCCATGACAAATGGCTTTCAGACCAGGATTGCGCCATTGCATGCTTCCTTGCTTTGA 399 0.411 MESHIYVLHVNPDSGLSIFDIANKHGMISSGYVWIATVNDDTIKLLQGVVALRNHTPDTDFKKSFISRNQLVLRQYILHGDGDGDSDPDYSKLVNQAFQRDFPLADDLSAAILRSMTNGFQTRIAPLHASLL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00125 132 Gene3D - 1 81 - -
Aip10g00125 132 PANTHER GLUTAMATE RECEPTOR 3.4 1 69 - -
Aip10g00125 132 Pfam Receptor family ligand binding region 4 69 IPR001828 -
Aip10g00125 132 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 69 - -
Aip10g00125 132 SUPERFAMILY Periplasmic binding protein-like I 3 75 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00125 Aip-Chr10 1135290 1136718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00125 1 68 Ion Channels AT1G05200 48.750 3.82e-20 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00125 K05387 - ini:109155838 97.8265