Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00105 ATGGCACGTGGAAGGGAATCTGAGCTCGTCCTCTTCGTCGTCGTCGTCGTCGTTGAAAATCATACATTAGAGGGGAAGAAACAGCGCCATCCCATGGCGCTGTTCAAAAAGTTCTTCTACCGGAAGCCGCCGGATCGACTCCTTGAGATCTCCGAGAGGGTCTTTGTATTTGACTGTTGCTTCTCGGCGAATGTGTTGGAAGAAGAAGCATACAGAGATTATATAGGGGAAATAGTAGCACAGCTAAAAAATCAATACTTTACAGATGCTTCAATCATGGTATTCAATTTCAGAGACCGGGAAACGCGGAGCCAGATGTCATCAAGTGAAAGCTGGTTGTCTGTGGAGGGGCAGCATAACGTGGTGTTATTGCATTGCGAAAGGGGGGGTTGGCTTGTCTTGGCGTTCATGCTAGCAGGCTTTCTTTTGTACAGGGGGCAGTATACAGGGGAGTTGAAGACTCTTGAAATGATGTACAAGCAAGCATCTAGAGAAGTCTTACGACTCTTTTCTCCTTTGAATCCCCAACCTTCTCAGTTGAGATATCTCCAGTATGTTTCCAGAAGACATTTGGGTTCTGAGTGGCCTCCACAAGAAACGCCCTTGCTTTTGGACTATTTGATCCTCAGAAACCTTCCATTGTTTGATGGTGGAGAAGGTTGCAGGCCTATTGTTCGTGTCTATGGTCCAGACCCTACAAGACCTGCCAATAGTAGCTCTAACATTCTTTTCGAAACTCCAGGTTCCCTCATTCAACACTACCCGCAGGCAGAATGTACGCTCGTGAAAATTGATATCCATTGTCGTGTTCAAGGGGATGTTGTTCTTGAATGCATACATTTGAGTGAAGATTTAGTTGGCGAGGAAATGATTTTTAGAATAATGTTTCATACTGCATTTGTTCGCTCAAACACATTGATCTTGAGTCGTGACGATATTGATATTGTGTGGGATTCAAAGGAGCAGTTCCCCAAGGACTTTAAAGCAGAGGTGCTTTTCTTGGACGCTTATGCTCTTGTACATAATCTATCCCCAATCAACGTAAGTCGAGATGTAAATGACAGTGAAAGTGATTCACCTGATGAGTTTTATGAAGTGGAAGAGATCTTTACGAATGCAATTGATGCACTTGAAGGTAGAGGAGAGTTTGGTTCTCCTATGGTCCGTGATGATAGAAGTCATATAGACATTTGGAAAGATTCTTCAGATCCTCAAGCCTCTACTTCAGATGATGGGACCTCTACTTCAGATGATGGGAATCACCAACAGGAGGTTGGAAGGGTAGAATCTGATGTTAACATAGTTAAAGACATTGTTATTGATGATGTCAAATACAAGTTTCAAGAGATGACAGATTCGGATCCTCATGAGGTTAAAGACATTGTTGTCGATGAAGTGGAGATTAAGTCGAATTCAATTGCAGATAAAATGAATTTGCAAGATGAGGTGACAATTATGCACAAAAATTTTGATGAAAAAGAGGAAAAGCATGATCTTTCTATGTCACATTCTGATCATAAACTACATTCATCTACTGAAAAGAAGCATCATTCTCCCAAGTTAAAGATTAAACATCATGAACAACATAGTCACGAACAACATGGTGATGAGGCAAAGCATAACCACGAACAACATGGTGTTGAGGCAAAGCATCACCACGAACAACAGGGTGTTGAGGGAAGACGTCATCATCAGGAACATCATGAACGTCACCCTGAACATCATGGTCACGAGGGAAAGCATGCAAAGGCAAGTGTAGCAGCTAAGTGGATTCCAAGTAACAAGGGTTCTTACCAGGATTCAATGCATGTATATTATCCAGCGTCAAGCCCCCATTACGTACCAACGAGTCCTCGAGGAAGGTCTCATAGTATTTCCCATCTTTCTGAGTTGAAAAGTCCTAAAGGGAGGAGCACTTCAAAATCTTTAGAACATATAGAACTTGATACTACCTCTCCATCGTCATCCTCACCTTCAGTTAAAGACCCACCTCTTGAGTCAACCACTCAAGAACCACACCTTACTTCAAATCCAATACTTCTGCCATCTGTTTATCCATCCGTATCTGTAGTTGGGGAATTATCAAATGTAGTCTCCCTTTCTAATTCACCACCACCATCATTAACAACACCACCCCCTCCACCTCCACCACTACCACCACCTTTTTCAAAATATGGAGTTCCAACAATTCCTCCATCTTCCCCTCTCTATATTCCTTTTACACAAGAAGATCCTAGACATCTTCCCTTGCCGACCTCCACTACATTGTTTCAAATTCCACCACCACCACCTTTACCACCATCATCCTTGACTTTACCATCCTTCACTAATGTAGATAGTAATCCACCACCACCCCCTCTTTTACCTGAATGTCTACCAACACAACCTCCATCTCCCTTGATTACATGTCCACCACCGCCACCGCCACCACCGCCACCACCACCACGGCCTCTACCCCCACCCATTTCAAGTAGGGCTTCACCGCCACCACTACATTCTTCTCCATTAAATGAATTACTTGAAACACCACCACCACTATTTCCTTCATCAAGTGGAGCACCACCTATACCACAACCTCCTCCACCAACACCAGCACTTCCTTCATCAAGTGGAGAACCACCTGCTCCTCCATCAAATGCACCACTATCAACACCACCATCCCCTCCGTTATCAAGTGGAGCACCACCACTACCATCACTACTTGCTTCATCAAGTGGTGCACCACCTATACTACCACCAGCTCTTCCTCTATCACACGAAGCAGCAGCACCACCACCATCACTTCCTTCGTTAAGTGTAGCACTACACATGCCACTACCTCGCCCTCCTCCACCAATTTATAGAAATCAACCTCCTCCACCTCCTCCAATGAATGAATCACCCTCTCCTCCACCCACTCCTCCGCCTACTCCTCCGCAACCTCCAATGCATGCTATATCCCCTCTGACAATGCATGCAGCACTATCTCCTCCCCCACCTTCTCCGCCACCTAGTGCTCCTCCCTCACCTCCGAAGCCTGCAGCACTACCTCCTCCACCACCTTCCACGCATGCAGCACTATCACCTTCGGCAGCTCCGAATCATACAACACCACCTCCAATGCATTCAGCACCACCACCTCCGCCACCTCCTCCCCCACCTCCAATGCATTCAGCACCACCACCTCCGCCACCTCCGCCACCTCCTCCCCCACCTCCAATGCATTCAGCACCACCACCTCCGCCACCTCCGCCACCTCCTCCCCCACCTCCAATGCATTCAGCACCACCACCTCCGCCACCTCCGCCACCTCCTCCCCCACCTCCAATGCATTCAGCACCACCACCTCCGCCACCTCCGCCACCTCCTCCCCCACCTCCAATGCATTCAGCACCACCACCTCCACCTCCTCCTCCGCCACCTCCGCCGTCTACAATGCATGCGGCGTCACCTCAGATGCATGGAGCAACACCTCCTCCACCACCTCGGGTAAATGCAGCACCACCACCTCCGCCGCCTCCGATGCATGTAGCGCCACCTCCAGTGCCACCACCGCCACCTCGAATGCCCGGAGCGCCACCACCTCCACCTCGAATGCCCGGAGCACCACCGCCACCTCCGATGCCAGGAGCGCCACCTCCTCCACCTCGAATGCCCGGAGGGCCTCCACCTCCTCCAATGCCTGGAGCACCTCCGCGAGGACCAGGCCCTCCTCCGCCTCCTCCTCCTGGAGTTGGTGGCCCAGGCCCACCTCCGCCTCCTGGTAGTGCTCCAGGTGGTGGACCTCCACCGCCTCCGTTGGGAAGAGGTGGTGGAGCTGCTAGAGGGCGTGGGCTCACACGTAATACAGCGATGCCTCGACGATCCCCCTTTAAGCCTTTGCATTGGAGTAAGGTTAGCAGGGCAATGCAAGGGAGCTTATGGGAAGAATTGCAAAGAAGTGCGGAACTTCAAACTGCACAAGAGTTTGACGTTTCAGAGCTGGAGAAGCTTTTTTCTGCAAGTGCTCCAAAAGCTGCTGATAAATCTGCCAAATCCAAAGCTGCTGCACCCAAAACTGATAAAGTCCAGTTGATCGATTTACGAAGGGCCTATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCACTTCCTGACATGATGGCAGCAGTGCTAGCCATGGATGAGGCAGTGTTAGATGGTGATCAGGTGGAAAATCTCATCAAATTTTGTCCTACTAAAGAGGAGATGGAAACTTTGAAGGGATACACTGGTGACCCGGAGGCTTTAGGAAAATGTGAACAGTATTTTATGGAGCTGATGAAAGTGCCAAGAGTGGAGGCAAAATTAAGAGTGTTCTCTTTCAAGATTCAGTTTGGGACACAGGCTGAAGACTTCAAGAGCAGTTTAAACACTGTGAACTCTGCCTGTGATGAGGTCCGAAATTCAGTTAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGAAACACATTGAATGAAGGCACTGCAAGGGGAGCTGCAGTTGGGTTCAAGTTGGATAGTCTCTTAAAGCTTACTGACACTCGGGCTACTACCGGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTGGCTGAAAAGTCTCCATCACTCCTTGATTTTCACCTTGACCTAGTTAACCTGGAAGCAGCCACTAAGATACAATTGAAGATGTTAGCAGAAGAAATGCAGGCACTCATCAAGGGATTAGAAAAGCTTAAACAGGAGCTTGCTGCATCTGAAACTGATGGCCCCGTGTCTGATGTTTTCCGTAAGACACTTAAAGAATTCCTTTCTATAGCGGAGTCGGAGGTGGAATCTGTAACAAACCTATATTCTTCAGCGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGATCCAGCTCGCTGTCCATTTGAGCAAGTTACTGCTACTCTCTTGAATTTTACAAGACTGTTCCGAAAATCACATGATGAAAATGTCAAACAAGCGGAGGCAGATAAGAAGAAAGCGGAGAAAGAGGCTGAAATGGAGAGGGAGAAGGCTAAAGCCGGGACGCCAAGAAAGGGAGATGGCCAGACGCCGAGGAAGTTTGATAGAGACATGGATGGCCAGACGCCGAGGAAGTTTGACATGGATGGCCAGACACCGAGGAAGTTCGACATGGATGGCCAGACACCGAGGAAGTTCGATAGAGAGATAGATGCGGAGACACCAAGAAAGGGTGACAAAGAGATGGAAGAAAGCTGA 5226 0.4799 MARGRESELVLFVVVVVVENHTLEGKKQRHPMALFKKFFYRKPPDRLLEISERVFVFDCCFSANVLEEEAYRDYIGEIVAQLKNQYFTDASIMVFNFRDRETRSQMSSSESWLSVEGQHNVVLLHCERGGWLVLAFMLAGFLLYRGQYTGELKTLEMMYKQASREVLRLFSPLNPQPSQLRYLQYVSRRHLGSEWPPQETPLLLDYLILRNLPLFDGGEGCRPIVRVYGPDPTRPANSSSNILFETPGSLIQHYPQAECTLVKIDIHCRVQGDVVLECIHLSEDLVGEEMIFRIMFHTAFVRSNTLILSRDDIDIVWDSKEQFPKDFKAEVLFLDAYALVHNLSPINVSRDVNDSESDSPDEFYEVEEIFTNAIDALEGRGEFGSPMVRDDRSHIDIWKDSSDPQASTSDDGTSTSDDGNHQQEVGRVESDVNIVKDIVIDDVKYKFQEMTDSDPHEVKDIVVDEVEIKSNSIADKMNLQDEVTIMHKNFDEKEEKHDLSMSHSDHKLHSSTEKKHHSPKLKIKHHEQHSHEQHGDEAKHNHEQHGVEAKHHHEQQGVEGRRHHQEHHERHPEHHGHEGKHAKASVAAKWIPSNKGSYQDSMHVYYPASSPHYVPTSPRGRSHSISHLSELKSPKGRSTSKSLEHIELDTTSPSSSSPSVKDPPLESTTQEPHLTSNPILLPSVYPSVSVVGELSNVVSLSNSPPPSLTTPPPPPPPLPPPFSKYGVPTIPPSSPLYIPFTQEDPRHLPLPTSTTLFQIPPPPPLPPSSLTLPSFTNVDSNPPPPPLLPECLPTQPPSPLITCPPPPPPPPPPPPRPLPPPISSRASPPPLHSSPLNELLETPPPLFPSSSGAPPIPQPPPPTPALPSSSGEPPAPPSNAPLSTPPSPPLSSGAPPLPSLLASSSGAPPILPPALPLSHEAAAPPPSLPSLSVALHMPLPRPPPPIYRNQPPPPPPMNESPSPPPTPPPTPPQPPMHAISPLTMHAALSPPPPSPPPSAPPSPPKPAALPPPPPSTHAALSPSAAPNHTTPPPMHSAPPPPPPPPPPPMHSAPPPPPPPPPPPPPPMHSAPPPPPPPPPPPPPPMHSAPPPPPPPPPPPPPPMHSAPPPPPPPPPPPPPPMHSAPPPPPPPPPPPPSTMHAASPQMHGATPPPPPRVNAAPPPPPPPMHVAPPPVPPPPPRMPGAPPPPPRMPGAPPPPPMPGAPPPPPRMPGGPPPPPMPGAPPRGPGPPPPPPPGVGGPGPPPPPGSAPGGGPPPPPLGRGGGAARGRGLTRNTAMPRRSPFKPLHWSKVSRAMQGSLWEELQRSAELQTAQEFDVSELEKLFSASAPKAADKSAKSKAAAPKTDKVQLIDLRRAYNTEIMLTKVKMPLPDMMAAVLAMDEAVLDGDQVENLIKFCPTKEEMETLKGYTGDPEALGKCEQYFMELMKVPRVEAKLRVFSFKIQFGTQAEDFKSSLNTVNSACDEVRNSVKLKEIMKKILYLGNTLNEGTARGAAVGFKLDSLLKLTDTRATTGKMTLMHYLCKVLAEKSPSLLDFHLDLVNLEAATKIQLKMLAEEMQALIKGLEKLKQELAASETDGPVSDVFRKTLKEFLSIAESEVESVTNLYSSAGRNADALALYFGEDPARCPFEQVTATLLNFTRLFRKSHDENVKQAEADKKKAEKEAEMEREKAKAGTPRKGDGQTPRKFDRDMDGQTPRKFDMDGQTPRKFDMDGQTPRKFDREIDAETPRKGDKEMEES 1741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00105 1741 MobiDBLite consensus disorder prediction 494 584 - -
Aip10g00105 1741 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 198 333 IPR035892 -
Aip10g00105 1741 Gene3D Protein tyrosine phosphatase superfamily 36 191 IPR029021 -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 847 895 - -
Aip10g00105 1741 Gene3D Formin, FH2 domain 1293 1682 IPR042201 -
Aip10g00105 1741 PRINTS Proline rich extensin signature 747 763 - -
Aip10g00105 1741 PRINTS Proline rich extensin signature 652 664 - -
Aip10g00105 1741 PRINTS Proline rich extensin signature 769 786 - -
Aip10g00105 1741 PRINTS Proline rich extensin signature 716 737 - -
Aip10g00105 1741 PRINTS Proline rich extensin signature 792 817 - -
Aip10g00105 1741 PRINTS Proline rich extensin signature 704 716 - -
Aip10g00105 1741 ProSiteProfiles C2 tensin-type domain profile. 199 336 IPR014020 -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 612 679 - -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 755 770 - -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 525 584 - -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 494 512 - -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 698 1290 - -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 909 923 - -
Aip10g00105 1741 Coils Coil 1552 1579 - -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 1147 1262 - -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 936 978 - -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 778 828 - -
Aip10g00105 1741 SMART it6_source 513 1732 IPR015425 -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 986 1019 - -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 645 679 - -
Aip10g00105 1741 PANTHER FORMIN-J 32 837 - -
Aip10g00105 1741 PANTHER FORMIN-J 1207 1678 - -
Aip10g00105 1741 Gene3D - 202 333 - -
Aip10g00105 1741 Pfam C2 domain of PTEN tumour-suppressor protein 198 333 IPR014020 -
Aip10g00105 1741 Coils Coil 1646 1675 - -
Aip10g00105 1741 Pfam Formin Homology 2 Domain 1279 1645 IPR015425 -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 400 421 - -
Aip10g00105 1741 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1347 1673 - -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 1026 1140 - -
Aip10g00105 1741 SMART PTEN_C2_2 197 335 IPR014020 -
Aip10g00105 1741 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1274 1671 IPR015425 -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 397 429 - -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 705 735 - -
Aip10g00105 1741 MobiDBLite consensus disorder prediction 1650 1741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00105 Aip-Chr10 952336 961532 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00105 32 636 FH2 protein (formin) Gene Family AT5G07740 47.531 1.28e-158 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00105 - - ahf:112783432 880.937