Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00095 ATGAATCTCAACTTCTTGCTTCGCTGCTTCTCCCCCTTATTCGCCGATTTTGAGCAGCACTTCGTGACGTCACTCTACAGCTCTGCTCTTGACCCGTCGCTGCTTCATGTACATCTCCACTCTCCTTCTCCATCACATCTTTTTCAGTTCTCACAATTGAGTTACCCTTTGTGGCCTCCCCATATTCACACAGCCTCCTTTCTCTTGCCTGAGCTTCACCGGCCTCGTCGTTTTCTTCTGCTGTCGAGCAATGCATATAGACGTACACCTACCTTTCACTTTCGATTAGAAAGGAGAAGAAAACCAGGACCAAGACGAGGCAGCAGCATTTGTTGTTGTTGTGGTTCTGCCTCTGAGTGGGAACTTAAGGAAGCAGGTATAGCCGTGTCAACTTTCCTTCAAGGATTAGGGGTGTCAGAGGAGGAGTCCGTATCCATCGCATCCAAGTCACCCTCTTACTCCAACATGTTGGTGGAGAGTGTCAGGGATTTGGACCAACACTCCATGTGGAATTCCGATTCGGCCTCCTTGGGCTTCAGGGAAAAGCTTCTTCACATTGCCTCCGTCAAAGGTGACAATGGAAAACTCCCTTACTTTGAGAGTCTCGGCTTCACTCACTCTTCATCTATCACTCTTGCTAGGTATCTCTCCTCTCAGAACCTCCCATCCCTCATGCACAAGGTTGCATCCATCAAGGACCTCTTCTTTTCTCATCAAGCTGATCACCTCCTCATCAACAACATTCGTCGCATGATGCTCCACCTGTCCATTCCAATCGACGATGATCTACAACATATTCTCTCCTTCTTTGAGAAGCTTGAAGCCAGGCGTGGAGGCTTAAATGTCTTGCTCTCTGACAAAGACACTGCCTTTCGCCATTTGATTGATTCCTTTCCTCGTTTACTTTCACTCTCACTGGATAACCACATCGTTCCTATTATCGATTTTCTCCACAATATTGGAGTTCCCAGAGTTCACATCACAACCATAATACTCTCTTTTCCGCCTATTCTGTTCTGGAATATTCAACTCCTTAAAGCTAGACTCCTCGCCTTGAAACAGATTCATGTGGTGGATAAAGATTATATCAAGTTGTTGATCAGATATCCTTGGGTTCTATCTACAAGCATTCAAGAGAACTATGAGGAGGTTCATGGATTTTTTCTTTCTGAGAAGGTTAGAAAGATATGTATTGACTCTGCAATCAGAGGCCAACCATACCTGTTGGGTTGTTCAACAAGCAAGCTGAAGTCGATGCTGGATCAGTTGGCTGATCTTGGAGTTAAGGGAAATAAGTTAGATAGAGTTATTGCTAGAAGCCCGCAGCTACTATTGCGGAAGCCCAGAGATTTTCTACAGGTTGTTCTGTTCTTTGAAAATATGGGCTTGGATAGAGAAATTGTTGGGAGAATTCTTTCTCGCTGCCCAGAAATTTTCGCTGCCAGCATCAATAAAACTCTTAAGAGGAAGATTGAATTCCTTTCTGGGGTTGGCGTTTCGGAAGCATATCTTCCTGGGGTAATCAGAAAGTATCCGGAATTACTTCTAACGGACACTGATAAAACCATACTGCATCGGCTGATGTACCTGATGAAGTTAGGACTTTCGGAGAAAGAGATTGGGTTTATGGTGCGCACGTTTTCTCCGCTCCTCGGGTACAGTATAGAGGAGGTTTTGAGGCCAAAAATAGAATTCTTGGTGAAGTCGATGGGGAGGCCGGTACGAGAAGTTGTCGATTACCCTCGGTATTTTAGCTATTCATTAGAAAAAAAGATAAAGCCAAGATACTTTGTACTCAAGGGAAGGCACATTGAATGTAGTTTAAAGGATATGCTGGGAAAAAATGATGAGGAATTTGCTGCAGAATTTATGGGTGTGGGTCTTGGAGGGATGCTTGACCCTCCTCTCTGTTCTGAGAATGTGTTGGATTGTTGA 1935 0.446 MNLNFLLRCFSPLFADFEQHFVTSLYSSALDPSLLHVHLHSPSPSHLFQFSQLSYPLWPPHIHTASFLLPELHRPRRFLLLSSNAYRRTPTFHFRLERRRKPGPRRGSSICCCCGSASEWELKEAGIAVSTFLQGLGVSEEESVSIASKSPSYSNMLVESVRDLDQHSMWNSDSASLGFREKLLHIASVKGDNGKLPYFESLGFTHSSSITLARYLSSQNLPSLMHKVASIKDLFFSHQADHLLINNIRRMMLHLSIPIDDDLQHILSFFEKLEARRGGLNVLLSDKDTAFRHLIDSFPRLLSLSLDNHIVPIIDFLHNIGVPRVHITTIILSFPPILFWNIQLLKARLLALKQIHVVDKDYIKLLIRYPWVLSTSIQENYEEVHGFFLSEKVRKICIDSAIRGQPYLLGCSTSKLKSMLDQLADLGVKGNKLDRVIARSPQLLLRKPRDFLQVVLFFENMGLDREIVGRILSRCPEIFAASINKTLKRKIEFLSGVGVSEAYLPGVIRKYPELLLTDTDKTILHRLMYLMKLGLSEKEIGFMVRTFSPLLGYSIEEVLRPKIEFLVKSMGRPVREVVDYPRYFSYSLEKKIKPRYFVLKGRHIECSLKDMLGKNDEEFAAEFMGVGLGGMLDPPLCSENVLDC 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00095 644 SMART mt_12 434 464 IPR003690 GO:0003690|GO:0006355
Aip10g00095 644 SMART mt_12 469 500 IPR003690 GO:0003690|GO:0006355
Aip10g00095 644 SMART mt_12 574 605 IPR003690 GO:0003690|GO:0006355
Aip10g00095 644 SMART mt_12 505 536 IPR003690 GO:0003690|GO:0006355
Aip10g00095 644 SMART mt_12 399 429 IPR003690 GO:0003690|GO:0006355
Aip10g00095 644 SMART mt_12 292 323 IPR003690 GO:0003690|GO:0006355
Aip10g00095 644 SMART mt_12 541 573 IPR003690 GO:0003690|GO:0006355
Aip10g00095 644 SMART mt_12 363 394 IPR003690 GO:0003690|GO:0006355
Aip10g00095 644 PANTHER CGI-12 PROTEIN-RELATED 445 626 IPR003690 GO:0003690|GO:0006355
Aip10g00095 644 PANTHER CGI-12 PROTEIN-RELATED 93 448 IPR003690 GO:0003690|GO:0006355
Aip10g00095 644 Gene3D Transcription termination factor 3, mitochondrial 412 628 IPR038538 -
Aip10g00095 644 Pfam mTERF 314 620 IPR003690 GO:0003690|GO:0006355
Aip10g00095 644 PANTHER TRANSCRIPTION TERMINATION FACTOR 4, MITOCHONDRIAL 445 626 - -
Aip10g00095 644 PANTHER TRANSCRIPTION TERMINATION FACTOR 4, MITOCHONDRIAL 93 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00095 Aip-Chr10 870752 874719 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip10g00095 mTERF 4.9e-90 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00095 K15032 - gmx:100802127 680.633