Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00092 ATGGATAAGAAGGTAGAGGTTGTAACAGATGAAGTTGATGGATTGAAATTCAAATTAACGGATGGTGTTGATGTGGCAAAAGATGGAATTATTTACTTCACAGATGCTACTTACAAATACTCTTTAGAGGACCACTTCTTAGACTTGTTGGAGGATCAACAATTTGTCATCTTCTGTGAAAGTTTTCTGATGAAGTGCAAGAAATATTACATACAAGGCCCTAAGAAAGGTACCATTGACAAGTTTTGTGACCTACCTGGTGCTCCTGATAATATTCATTATGATGGACAAGGAAACTATTGGATTGGAATAGCCACGGAATATACAGCTGAAGCGGAATTAGCATACAAATACCCTTTCATTCGGAAGGCTATAATGATGTTTTCAAAGTATATAATGAATCCAAGTTTTGCCAAGAATGGAGGAGTTATAGCTGTTGACTTGGAAGGAAACCCAATTGCTCACTATTATGATCCCAAATTATCATTAACTAGTGGAATTAAAATTGCAATAGAAAACAACAACAATAACAATGATGAGCTTAATGCACTGCTCAAGTTCAAGGAAGCTATATCCAATGACCCTTATAAAATCTTAACCTCTTGGAATAGCTCCAACCAATTTTGCAATTGGCATGGAATCACATGTAGCAAAAGAGAGCAAAGAGTTTTGGAATTGAACTTAGAAGGATATCAATTGCAAGGGTTCATGTCACCCCATATTGGCAATCTCTCTTCTTTACAAACTCTCAACCTTCAAAACAATAATTTCTATGGCGAAATCCCGCCGGAACTTGGTCATCTGTCTAGGCTGCGACTACTCTTTCTCGCCAATAACTCGCTGGCCGGAGAAATTCCGACCAACTTAACAAGTTGTTTGGAACTTAGGCGTATATATTTACAAGGGAACAATCTTAGTGGAAAAATACCAATGGAGATTGGTTCTCTTAAAGAACTTCAATGGTTATGGTTGGCCAAGAATCATTTATCAGGGAAGATACCATATTCCATATGGAATCTTTCATCCCTTGTTGTACTTTCTCTTTCATATAACAACTTGGAGGGAAAGTTACCACAAAACATTGGCAACTTAAAACATTTGCAAATTCTTGGTATGGTTTCCAACAAATTATGTGGTATGCTTCCTTATTCTCTTTACAATGTGTCATCTCTTACTTACATCTCGGCCGCGAACAACCACTTTAACGGCTCTCTTCCGGCCGACATGTTCTTCTCCCTCCCTAGGCTCCAACTTTTTGAAATTGGAAGCAACCAAATGTCAGGTTCAATCCCTGTTTCAATCACCAATGCAACCTCTCTTAGAAGATTTGATGTCACTAATAATAGTTTTTTAGGGGAAGTTCCAAGTCTAGCAAAGTTGCATGATCTTTGGTGGTTGAATTTTGGTTCCAACTATCTAGGAAGTTATTCACTTAAGGACTCTGAGTTCTTAGAATCTTTGCAAAATTGTAGTAAGTTGGAAATATTGGACATATCCGCCAACAATTTCGCTGGCCGTTTGCCGGAAAATATAGCCAACTTTTCCGACCGGCTCAGAGAAATATACCTTAGTGATAACCTATTGTTTGGAGAAATTCCTGCCACTTTAGGAAATCACATTAATTTAGATGTCCTTACCATGGAACTCAACTTTTTTGTAGGATCAATTCCAACAACATTTGTAAAGTTTCAAACAATGAAAAGATTGGATTTGAGTTATAACAAAATCTCAGGACAAATTCCACCCTTTATAGGGAATCTTAGCCAATTGCTTGAGCTAAGAATCTCAGACAACATGCTAAGAGGAAACATTCCTCCAAGTATAGGAAATTGCAAAAGTTTAGAAATTCTAGACCTTGCAACTAACAATCTTAGTGGAGTCATACCTCCAGAAGTTATAGGTCTTTCTTCTTTGACAGTCCTACTAAACTTGTACGAAAACTCGTTGACCGGATACCTTCCGGGACAAGTAAGCCTGTTGAAATTTATTCGTCAGTTGGACGTCTCGAAAAATTATCTGTCTGGCGAAATTCCTGAGAATATTGGAGAGTTGGTAAACCTCGAGTACCTTAACTTACAAGGTAATTCATTCAATGGAACCATACCTTCATCTTTGGCTATGGTGAAGAGTCTCCAACATTTAGACCTATCAAGAAACAACTTGTCTGGATCGATTCCAACCGCGCTACAAGATCTATCTCTTCTAGAATACTTAAATGTTTCTTTCAACATGTTGGATGGTGAAGTTCCAAGAAAAGGTGTGTTTGGAAATTCAACTGCTATAACACTATTTGGTAATGTTAAGCTTTGTGGAGGAATCTCTGAGCTGAAGTTACCACCATGCCACGGTTCAAAACAACCAAGACATCATAGTTTCAAGGACACAGCAGTGATGATAGTTTCTATGGTTGCTTTTCTTGTTCTGTTGTGTTCTATGTTTGTTGCTTATATGATGAGGATAAGAAAGAATGAACCAATTTCAGATTCATCAGCATTAAATGACTTATTTGAAAAGGTGTCATATCAAAGACTTCACCAAGCAACTAATGGTTTCTCAGCTAGCAACTTGATAGGGTCTGGAAATTTCGGCTTTGTTTACAAAGGAAATCTCGCCTCGACTAACAAAGTTGTTGCTATAAAGGTCTTAAACCTTCAAAAGAAAGGAGCTCGAGCGAGTTTCATGGCCGAATGCAATGCACTGAAACACATTAGCCATCGAAATTTGGTTAAGATTCTAACCTGTTGCTCGAGTACAGATCACAACGGCCGAGAATTCAAAGCTCTGGTGTTCAAATACATGGAAAATGGAAGCTTGGATAAATGGTTGCATCCAGATATTGAAAGATTAGAAGTGCCACAAACCTTGATGAGTCTAAACCAAAGAATAAGGACTCTAACTGATGTTGCTTCAGCAATAAGCTATCTTCACTACGAATGCGCGCAGCCTATTGTTCATTGCGATTTAAAGCCGAGCAATATTCTTCTAGATGATAACATGGTTGCTCATGTTGGTGACTTTGGATCTGCAAGATTTCTGTCAAAAATCAATGACAAATCATATAAGCAAAATATCATATCCAGAATAAATGGTACTATTGGTTATACTCCTCCAGAGTATGGAATGAGTTCAGAGGTGTCGAAACAAGGCGACACGTATAGCTTTGGGATTCTTGTTTTGGAAATGTTAACAGGAAGAAGACCTACTGAGGAAACTTTTCAACTTGGTCACAATCTCCATAGCTATGTAAGGATGGCATTTCCAGATAAACTCTTGCAGATTGTAGATCCAATTCTTCTGTCCATAGAAATAGAAGGAACAACAGCAAAGAAATGTTTGTATTCACTCTTTAGAATTGGACTTGCTTGTTCTGTGGAGTCACCAAAAGAAAGAATGAGCATGGAGTGTGTTAGCAGAGAACTAAACCTTATAAAGAATTCCTTATAA 3444 0.3775 MDKKVEVVTDEVDGLKFKLTDGVDVAKDGIIYFTDATYKYSLEDHFLDLLEDQQFVIFCESFLMKCKKYYIQGPKKGTIDKFCDLPGAPDNIHYDGQGNYWIGIATEYTAEAELAYKYPFIRKAIMMFSKYIMNPSFAKNGGVIAVDLEGNPIAHYYDPKLSLTSGIKIAIENNNNNNDELNALLKFKEAISNDPYKILTSWNSSNQFCNWHGITCSKREQRVLELNLEGYQLQGFMSPHIGNLSSLQTLNLQNNNFYGEIPPELGHLSRLRLLFLANNSLAGEIPTNLTSCLELRRIYLQGNNLSGKIPMEIGSLKELQWLWLAKNHLSGKIPYSIWNLSSLVVLSLSYNNLEGKLPQNIGNLKHLQILGMVSNKLCGMLPYSLYNVSSLTYISAANNHFNGSLPADMFFSLPRLQLFEIGSNQMSGSIPVSITNATSLRRFDVTNNSFLGEVPSLAKLHDLWWLNFGSNYLGSYSLKDSEFLESLQNCSKLEILDISANNFAGRLPENIANFSDRLREIYLSDNLLFGEIPATLGNHINLDVLTMELNFFVGSIPTTFVKFQTMKRLDLSYNKISGQIPPFIGNLSQLLELRISDNMLRGNIPPSIGNCKSLEILDLATNNLSGVIPPEVIGLSSLTVLLNLYENSLTGYLPGQVSLLKFIRQLDVSKNYLSGEIPENIGELVNLEYLNLQGNSFNGTIPSSLAMVKSLQHLDLSRNNLSGSIPTALQDLSLLEYLNVSFNMLDGEVPRKGVFGNSTAITLFGNVKLCGGISELKLPPCHGSKQPRHHSFKDTAVMIVSMVAFLVLLCSMFVAYMMRIRKNEPISDSSALNDLFEKVSYQRLHQATNGFSASNLIGSGNFGFVYKGNLASTNKVVAIKVLNLQKKGARASFMAECNALKHISHRNLVKILTCCSSTDHNGREFKALVFKYMENGSLDKWLHPDIERLEVPQTLMSLNQRIRTLTDVASAISYLHYECAQPIVHCDLKPSNILLDDNMVAHVGDFGSARFLSKINDKSYKQNIISRINGTIGYTPPEYGMSSEVSKQGDTYSFGILVLEMLTGRRPTEETFQLGHNLHSYVRMAFPDKLLQIVDPILLSIEIEGTTAKKCLYSLFRIGLACSVESPKERMSMECVSRELNLIKNSL 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00092 1147 SMART serkin_6 851 1143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00092 1147 Gene3D Transferase(Phosphotransferase) domain 1 933 1147 - -
Aip10g00092 1147 SUPERFAMILY Calcium-dependent phosphotriesterase 3 165 - -
Aip10g00092 1147 PANTHER LRR RECEPTOR-LIKE KINASE 169 1146 - -
Aip10g00092 1147 ProSiteProfiles Leucine-rich repeat profile. 710 733 IPR001611 GO:0005515
Aip10g00092 1147 SMART LRR_typ_2 587 611 IPR003591 -
Aip10g00092 1147 SMART LRR_typ_2 708 731 IPR003591 -
Aip10g00092 1147 SMART LRR_typ_2 340 364 IPR003591 -
Aip10g00092 1147 SMART LRR_typ_2 244 267 IPR003591 -
Aip10g00092 1147 SMART LRR_typ_2 268 292 IPR003591 -
Aip10g00092 1147 SMART LRR_typ_2 732 757 IPR003591 -
Aip10g00092 1147 SMART LRR_typ_2 684 707 IPR003591 -
Aip10g00092 1147 SUPERFAMILY L domain-like 517 771 - -
Aip10g00092 1147 Gene3D Ribonuclease Inhibitor 179 294 IPR032675 -
Aip10g00092 1147 Gene3D Ribonuclease Inhibitor 409 460 IPR032675 -
Aip10g00092 1147 ProSitePatterns Protein kinases ATP-binding region signature. 857 880 IPR017441 GO:0005524
Aip10g00092 1147 Gene3D - 1 50 IPR011042 -
Aip10g00092 1147 Gene3D - 51 129 IPR011042 -
Aip10g00092 1147 Pfam Leucine rich repeat N-terminal domain 177 217 IPR013210 -
Aip10g00092 1147 Gene3D Ribonuclease Inhibitor 472 790 IPR032675 -
Aip10g00092 1147 ProSiteProfiles Protein kinase domain profile. 851 1142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00092 1147 PANTHER OS04G0122200 PROTEIN 169 1146 - -
Aip10g00092 1147 SUPERFAMILY Protein kinase-like (PK-like) 828 1140 IPR011009 -
Aip10g00092 1147 Gene3D Ribonuclease Inhibitor 301 408 IPR032675 -
Aip10g00092 1147 Gene3D Phosphorylase Kinase; domain 1 812 932 - -
Aip10g00092 1147 Pfam Leucine rich repeat 686 745 IPR001611 GO:0005515
Aip10g00092 1147 SUPERFAMILY L domain-like 178 473 - -
Aip10g00092 1147 Coils Coil 171 191 - -
Aip10g00092 1147 Pfam Protein kinase domain 853 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00092 1147 ProSitePatterns Serine/Threonine protein kinases active-site signature. 983 995 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00092 Aip-Chr10 853614 862381 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00092 183 1144 Receptor kinase-like Gene Family AT3G47570 44.353 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip10g00092 Pkinase 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00092 - - ahf:112783139 1652.11