Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00089 ATGAGGCCTCAGCATGTTGAAGATGGTGATCATGAACACCATAGTAATGATAATAAGAACAACAACTCTTCATTTTCAACAAGTGCTTATCACATGGAGAGGGTTTTCCCTGTTTATGCCATGGGAATTCCAAACCCATTACACTCTTCTGCCTTTCATAATAACCATTTGGATATTTCTCTTCACACCATTTGGGATCATATAAGAGAAGAAGCCAGGTTTGAGGCAGAAAGGGAACCAATTTTGAGTAGCTTCTTGTATGCAAGTATTTTGTCACATGATTGCTTAGAGCAAGCACTAGCATTTGTTCTTGCAAATCGTCTCCAAAATCCTACTCTTTTGGCAACTCACTTAATGGATATCTTTTGCAATCTCATAATGCATGATGAATCTATCCAAAGATCTATTCGTTTGGATCTCAAGCAGGCATTTAAAGACAGAGATCCTTCTTGTTTGTCATATTGCTCTACACTTTTGAATACAAAGGGTTACCATTCTTTGCAAGTGTACCGTGTAGCGCACGCTTTGTGGGGCGAGGGTCGAAAGGTATTGGCTTTAGCTTTGCAAAGTAGAGTTAGTGAGGTTTTCGGCATTGATATACATCCCGCTGCAAAAATAGGAGATGAAATTCTATTAGATCATGGAACACGTGTGGTTATTGGTGAAACTGCCATTGTTGGAAACAGAGTCTCATTGATGCAAGGTGTGACTTTAGGAGAAACAGGGAAAGAAGGGGGTGATAGGCATCCCAAAGTAGCAGAAGGTGTTCTAGTTGGGGCAAGTGCAATCATACTTGGTAACATAAGAATTGGTGAAGGTGTTAAGATTGTTGCTGGTTCTCTTGTCTTGAAAGATGTTCCTCCCCATAGCATTGTGGCAGGTGTACCAGCACATGTTATTGGATGCTTAAATGAGCATGATCCATCTTTAACCATGAACCCAGGTATAATAAAGCAAAAAGTATAA 966 0.3996 MRPQHVEDGDHEHHSNDNKNNNSSFSTSAYHMERVFPVYAMGIPNPLHSSAFHNNHLDISLHTIWDHIREEARFEAEREPILSSFLYASILSHDCLEQALAFVLANRLQNPTLLATHLMDIFCNLIMHDESIQRSIRLDLKQAFKDRDPSCLSYCSTLLNTKGYHSLQVYRVAHALWGEGRKVLALALQSRVSEVFGIDIHPAAKIGDEILLDHGTRVVIGETAIVGNRVSLMQGVTLGETGKEGGDRHPKVAEGVLVGASAIILGNIRIGEGVKIVAGSLVLKDVPPHSIVAGVPAHVIGCLNEHDPSLTMNPGIIKQKV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00089 321 MobiDBLite consensus disorder prediction 1 24 - -
Aip10g00089 321 Gene3D Hexapeptide repeat proteins 199 320 - -
Aip10g00089 321 Gene3D serine acetyltransferase, domain 1 47 198 IPR042122 -
Aip10g00089 321 PANTHER SERINE ACETYLTRANSFERASE 10 313 - -
Aip10g00089 321 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 10 313 - -
Aip10g00089 321 Pfam Serine acetyltransferase, N-terminal 64 168 IPR010493 GO:0005737|GO:0006535|GO:0009001
Aip10g00089 321 SUPERFAMILY Trimeric LpxA-like enzymes 63 313 IPR011004 -
Aip10g00089 321 SMART SATase_N_2_a 64 169 IPR010493 GO:0005737|GO:0006535|GO:0009001
Aip10g00089 321 CDD LbH_SAT 196 296 IPR045304 -
Aip10g00089 321 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00089 Aip-Chr10 836602 840192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00089 32 319 Miscellaneous Gene Families AT2G17640 68.056 7.00e-130 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00089 K00640 - gmx:100778586 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00326 05 3658986 3663041 Aip10g00089 10 836602 840192 PCT
Aip10g00089 10 836602 840192 Aip05g00134 05 1562249 1564689 PCT