Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00088 ATGGGTGGTTCTGATGAAAACAATTCTAATTCAACCTTGCCCAGAATTCTTCAAGCAGGGATGAATAATCAGAATCAGAATGTTGGTACAAGAAAGTTTGGACAGAACAGAAGAGCATTGAGTGTGATCAATCAGAATCTAGTGCAAGGTCGATCTTACCCTTGTGTTGTTAACAAGAGACCTTTGCCTGGAAAACAAGAAATGTGTGAAAAGAAGCAGGCAGATCCAGTGCATCGTCCCATCACAAGAAGGTTTGCTGCTCAAATTGCTTCCCAGCAGCAACAATCTTGTGCTGAGGATCCTACCAAGTCGAACCCCTCGAATTCGACCAGATTTGAAGACCTAATCCTCATTGATGAGGAACAAAAGTTAACAGCAGATCAACCAGTGCCCATGTCCTTGGAGAAACCAAAACTAGTGCAGGAGGAAATTGAGATGGAGGATATAGTTGAGGAGGACTCTATTATAAACATCGATAGCAGCGATGTGGATGATCATCTTGCGGTGGTGGAATACATCGAAGATCTTCATGCACACTACAGGAAATTTGAGAGTTTGAACTGTGTCTCGCCGGATTATATGGCGCAACAATTTGACATTAATGAAAGAATGAGGGCTATACTTGTTGACTGGCTCATTGAGGTGCATGATAAATTCAACCTCATGCAAGAGACATTGTTTCTTACAATTAATCTCATAGACAGATTCTTGGCCAAACAAACTGTGATAAGAAAGAAGCTTCAGCTGGTTGGTTTGGTTGCCATGCTTTTGGCTTGCAAGTATGAGGAAGTTTCTGTGCCGGTGGTTGGCGATTTAATCCTTATTTCGGATAAAGCTTACACAAGGAAGGATGTTCTGGACATGGAGAAGTTGATGCTCAACACATTGCAGTTCAACATTTCTGTGCCAACTGCATATGTTTTTATGAGAAGATTCCTGAAGGCAGCTCAAGCCGACAAAAAACTTGAGCTGCTGGCTTTCTTCTTGATAGAGCTCTCTCTTGTGGAATATGATATGCTGAAGTTCCCGGCATCTTTGCTAGCTGCGGCCGCAGTCTACACGGCTCAATGCACTGTCAGTGGCTTCAAACAATGGAACAAGACATGTGAATGGCACACAAACTACTCAGAAGATCAGATATTCGAGTGCTCTCGGATGATGGTTGGCTTACACCAGAAGGCCGCGACTGCGAAACTCACTGGTGTGCGTAGGAAGTACAGTTCATCTAACTACAGCTATACTGCAAAATGCGAACCGGCATGTTTTCTTCTGGAGAACCAATTCTAG 1287 0.4328 MGGSDENNSNSTLPRILQAGMNNQNQNVGTRKFGQNRRALSVINQNLVQGRSYPCVVNKRPLPGKQEMCEKKQADPVHRPITRRFAAQIASQQQQSCAEDPTKSNPSNSTRFEDLILIDEEQKLTADQPVPMSLEKPKLVQEEIEMEDIVEEDSIINIDSSDVDDHLAVVEYIEDLHAHYRKFESLNCVSPDYMAQQFDINERMRAILVDWLIEVHDKFNLMQETLFLTINLIDRFLAKQTVIRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKDVLDMEKLMLNTLQFNISVPTAYVFMRRFLKAAQADKKLELLAFFLIELSLVEYDMLKFPASLLAAAAVYTAQCTVSGFKQWNKTCEWHTNYSEDQIFECSRMMVGLHQKAATAKLTGVRRKYSSSNYSYTAKCEPACFLLENQF 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00088 428 MobiDBLite consensus disorder prediction 88 109 - -
Aip10g00088 428 Gene3D - 189 301 - -
Aip10g00088 428 SMART cyclin_7 307 389 IPR013763 -
Aip10g00088 428 SMART cyclin_7 210 294 IPR013763 -
Aip10g00088 428 CDD CYCLIN 301 388 IPR013763 -
Aip10g00088 428 SMART Cyclin_C_2 303 420 IPR004367 -
Aip10g00088 428 CDD CYCLIN 204 293 IPR013763 -
Aip10g00088 428 PANTHER CYCLIN-B2-1 25 423 - -
Aip10g00088 428 PIRSF Cyclin_A_B_D_E 3 428 IPR039361 -
Aip10g00088 428 SUPERFAMILY Cyclin-like 302 419 IPR036915 -
Aip10g00088 428 SUPERFAMILY Cyclin-like 164 300 IPR036915 -
Aip10g00088 428 Pfam Cyclin, N-terminal domain 179 301 IPR006671 -
Aip10g00088 428 PANTHER CYCLINS 25 423 IPR039361 -
Aip10g00088 428 ProSitePatterns Cyclins signature. 205 236 IPR006671 -
Aip10g00088 428 Pfam Cyclin, C-terminal domain 303 418 IPR004367 -
Aip10g00088 428 Gene3D - 175 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00088 Aip-Chr10 832543 835975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00088 1 424 Core Cell Cycle Gene Families AT1G20610 55.196 2.75e-166 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00088 K21777 - gmx:100798068 566.229