Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00083 ATGGTGGTTGCTATCAAGAAATTGAACTCTGAAAGCACTCAAGGGTTTCAAGAGTGGCAGTCAGAAGTAAACTTCTTAGGAAGGCTTTCTCACCCGAACCTGGTAAAGCTATTAGGGTACTGTTGGGACGACGACGAGCTTCTACTTGTGTATGAGTTCATGCCAAAGGGGAGCTTGGAGAATCATCTTTTCAGAAGGAATCCTAACATAGAACCACTTTCATGGAACACCCGAATTAAGATAGCTATTGGCGCAGCAAGGGGTCTCGCTTTCTTGCACGCTTCCGAAAAACAAGTCATATACAGAGATTTCAAGGCTTCAAATATACTACTTGACGGGAATTACAACGCGAAAATATCGGATTTCGGCTTGGCTAAATTGGGCCCTGCTGTGGGAGCATCACATGTAACTACCAGAGTCATGGGCACATATGGCTATGCTGCTCCGGAGTACATTGCAACAGGTCACTTGTATGTGAAGAGTGATGTCTACGGCTTCGGCGTAGTTCTACTTGAAATGATGTCAGGCTTGCGCGCGCTCGATACAAAGCGGCCGACAGGGCAACAGAATCTGGTTGAATGGGTTAAGCCTAATCTCTCCAACAAGAGAAAGTTGAAAACCATAATGGATGCTAGGATTGATGGCCAATATTCACAAAAGGCGGCGCAGCAGGCGGCACAACTCACTCTGAAATGCTTGGAACCGGACCCCAAAAACCGACCGTCGATGAAAGAAGTTGTGGAGGCATTGGAAGCCATAGAATCAATGCAAGATAAATCCAAGGAGTCCAAGAATAGAGGTTCTCATTCTTCTGCTGCCTCTAAGAGTCACCATCATTCAAGGCAAAGAGTTTCAAAAGCAAAAGTATGA 870 0.4563 MVVAIKKLNSESTQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDDDELLLVYEFMPKGSLENHLFRRNPNIEPLSWNTRIKIAIGAARGLAFLHASEKQVIYRDFKASNILLDGNYNAKISDFGLAKLGPAVGASHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMMSGLRALDTKRPTGQQNLVEWVKPNLSNKRKLKTIMDARIDGQYSQKAAQQAAQLTLKCLEPDPKNRPSMKEVVEALEAIESMQDKSKESKNRGSHSSAASKSHHHSRQRVSKAKV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00083 289 Pfam Protein tyrosine and serine/threonine kinase 2 250 IPR001245 GO:0004672|GO:0006468
Aip10g00083 289 PIRSF ILK 1 270 - -
Aip10g00083 289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 99 111 IPR008271 GO:0004672|GO:0006468
Aip10g00083 289 Coils Coil 246 266 - -
Aip10g00083 289 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 1 269 - -
Aip10g00083 289 MobiDBLite consensus disorder prediction 271 289 - -
Aip10g00083 289 ProSiteProfiles Protein kinase domain profile. 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00083 289 PANTHER OS01G0588500 PROTEIN-RELATED 1 269 - -
Aip10g00083 289 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Aip10g00083 289 MobiDBLite consensus disorder prediction 252 268 - -
Aip10g00083 289 Gene3D Transferase(Phosphotransferase) domain 1 55 279 - -
Aip10g00083 289 SUPERFAMILY Protein kinase-like (PK-like) 2 251 IPR011009 -
Aip10g00083 289 MobiDBLite consensus disorder prediction 252 289 - -
Aip10g00083 289 CDD STKc_IRAK 2 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00083 Aip-Chr10 768841 772803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00083 1 260 Glycoside Hydrolase AT3G07070 50.958 3.11e-90 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip10g00083 Pkinase 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00083 - - gmx:100794193 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00083 10 768841 772803 Aip10g00083 10 768841 772803 ECH