Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00078 ATGGCCAGAAAAGTTCATAACCATAAGAGACATCATGAAGGTATGAATAATTCACAACATAGCATGAAGCTGCAAGAAGAAGCATCAAAGATTATGTACAAACCAGAAGTTAAATTACCTCACTCTACTAAAGGATCAAAGAACAATGGTTATTCAAATGTGAACTCAGTGAGAGAATTGATGAATGAGGAGTTATCTACACAATCATGCAACCGAAATAATGTACCAAGCATCGTGGCGAGGTTGATGGGACTAGATATGATGCCATTAGGCTCTAGATCTGTTGTTCTTCTATCAGATCAGTGCATAACTGATCAAAATATGGAGAATAAGATCTTTGATGATGATGGAATGGGAAAAAAGTTCACAAATCCAATGCTGCTGGAAGAAGAACTCAAGAAATTCAAGAGAGAATTTGAAGCATATCAAGCATTAAGGCTTAAGGAGTGTCCAAAAGTTGATGAAAGAATTCGAAGCGTTTCGCAAAGAACCAAGAGTGTTCAAGAATTGGTTCCATGTAATACAAATTCAAAGACAAAGAGAAAGGGAAAGGGAAAGGTAGCAATGAACAAATCTAGAAGAAGATTTGATGATACATCACTTTCACCAACTCAGATAACTATCTTGAAGCCTTGTTGCTACCATGAAGAGAGTTTGATCAATTCATCAGAAACTTCACAAGGGAGAACAAGTACTGGTTTAAAAGATTTTCTTGAGGAAGTTAAGGTGAAGTTGTTAAGTGAAATGCAGGGGAAAAGTACTTTGGAAAAGTGTTCTTCGGTTCGAGGAAGCGAAAATGAGAGACATAACATTAAAAAACAATCCAATTCTAAAGAAGTGGTTTGTCATAGATCAAGTGAGTTCATAGATTTTGTGACTAGGGATGTTGTTGAAGCAAATTTACTCCATTCACAATCAACAAGATCTTATCGAAGTGAAATCGAGTTCAATGGACAGAGTTCCCCTGAATTTATCAGCAGAGGAACAATGAAGTATGCAAATTTGAATGATGATTCATTGCTTCAGAAGGAGTTATCTCCAATGAACCTTGTAAGATCCTTCTCAGCTCCTCTATCAGGAAGATTTAGCCGCTTTTCGACCGGTGATCAAATTCGGAAGAAGCTTGAAGATCTTGAAAGGATGTCTTTTGATGCTAAGAAGAAGAAGAAAAAAGATAGATTTGGAATTAGAGAAAAAGTTTCTTATCTTAAACAAAAGTTTGGTCTAAGAGGCAAGATTTTTTCCAAAAGGATTCATTCAATGGTTGAAACTCCAAATAGCATTGAAGATGGTTTCATGATGAGAGACCTCAGAAGTGGACCAACTGTTCTCATGAAACATGGGAGAAACCATGATAATTTCACTGAGGTTCCTCCTAGTCCTGCATCTATGTGTAGCAGTGTTCATGAAGAACTTTGGAGGCAGAGTGCAATTTTAAGTCCAATTTCAACTCCAAGTGTATCTTCAGTAGATGATAGCATTATGCCACAGGTTTATGGAGATATCAActctgatttaaatgAACTAAGTAAGCAACTAAGCCAACTTGAGTTTGACAGCTCAGAAGAATTCGCAACAAAGCGAAAATCTGCCGAGTACGAAATAGAACGGCTACTCGATCCGGCGGAGTCTTATATAAGAGATCTTCTTGTTGCTTCTGGACTTTACTTTGGATCATGGGACAAATACCTACAAAAAGAGGACACATTTACAAATCCTATAGCCAACTCAATTTTTGAAGAAGTGGAAGAATCTCACAAGAAATGTTTGGTGAAAGAGAATATTATTGATAACAAGTTAGATCACAAAATGTTACTTGATTTGTTAAATGAGGCACTTTCCATTGTTCTTGGACAACCTTTGACAATGTCTAGATTCAGAAGGAAACTCAATAATTCATGCATAATACAAACTCCACCATGTGGGAAGGAACTATTGAAGCTAGTATGGGACATTATCCATGTTTCATTGTATCCTCCAATGTCTAACACATGTTCTTATTCATTTGATAGTTTGAAGGCACAAGATTTTGGATCCATATCATTGTATGGACTAATGAATGATGAGATCAATAATGTCTTAGAAATGGAGATGGCATGTTCAATTAGTGATGATTTGGTTGAAGAACTCATAAAGGATATGATGGGATTTTAA 2154 0.3607 MARKVHNHKRHHEGMNNSQHSMKLQEEASKIMYKPEVKLPHSTKGSKNNGYSNVNSVRELMNEELSTQSCNRNNVPSIVARLMGLDMMPLGSRSVVLLSDQCITDQNMENKIFDDDGMGKKFTNPMLLEEELKKFKREFEAYQALRLKECPKVDERIRSVSQRTKSVQELVPCNTNSKTKRKGKGKVAMNKSRRRFDDTSLSPTQITILKPCCYHEESLINSSETSQGRTSTGLKDFLEEVKVKLLSEMQGKSTLEKCSSVRGSENERHNIKKQSNSKEVVCHRSSEFIDFVTRDVVEANLLHSQSTRSYRSEIEFNGQSSPEFISRGTMKYANLNDDSLLQKELSPMNLVRSFSAPLSGRFSRFSTGDQIRKKLEDLERMSFDAKKKKKKDRFGIREKVSYLKQKFGLRGKIFSKRIHSMVETPNSIEDGFMMRDLRSGPTVLMKHGRNHDNFTEVPPSPASMCSSVHEELWRQSAILSPISTPSVSSVDDSIMPQVYGDINSDLNELSKQLSQLEFDSSEEFATKRKSAEYEIERLLDPAESYIRDLLVASGLYFGSWDKYLQKEDTFTNPIANSIFEEVEESHKKCLVKENIIDNKLDHKMLLDLLNEALSIVLGQPLTMSRFRRKLNNSCIIQTPPCGKELLKLVWDIIHVSLYPPMSNTCSYSFDSLKAQDFGSISLYGLMNDEINNVLEMEMACSISDDLVEELIKDMMGF 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00078 717 Pfam Domain of unknown function (DUF4378) 544 709 IPR025486 -
Aip10g00078 717 Pfam DUF761-associated sequence motif 76 89 IPR032795 -
Aip10g00078 717 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 167 332 - -
Aip10g00078 717 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 164 - -
Aip10g00078 717 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 335 714 - -
Aip10g00078 717 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 335 714 - -
Aip10g00078 717 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 164 - -
Aip10g00078 717 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 167 332 - -
Aip10g00078 717 MobiDBLite consensus disorder prediction 175 198 - -
Aip10g00078 717 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00078 Aip-Chr10 705259 709041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00078 63 714 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 35.042 1.21e-92 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00078 - - aip:107621743 1408.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00306 05 3441476 3446056 Aip10g00078 10 705259 709041 PCT