Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00070 ATGAGTGGCACATATGCTGAGAATTATCTTAGTGAGGTGTTTAACATACATAGATCAAGGCTTGTTCCTTTCAATTCTCTATCTGAATTTGAGAAGGCTTTGAAGGATGGACAAGACAATGGTGGTGTTGCTGCTATCATAGCTGAGCGTGCATACATGGAATTGTTCCTATCAACTAGATGTCAATTTGGTATTGTTGGTCAAGAATTCACCAAAATGGGATGGGGCTTTGCCTTTCCAAGGGACTCTCCCTTAGCAATTGACATGTCAACAGCTATTCTAAAACTATCAGAGAATGCTGTTGAGTGCCCAGATTTTGTAATTTCCTATACTTCAAGTGGAAAGACTCATGCTCTCAGAAGAATTTCCTACACCATTTTGCAGCACATATATGTCAGCTTCTGTTTATTGAACCAAACTTCAGAGTGA 429 0.3939 MSGTYAENYLSEVFNIHRSRLVPFNSLSEFEKALKDGQDNGGVAAIIAERAYMELFLSTRCQFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENAVECPDFVISYTSSGKTHALRRISYTILQHIYVSFCLLNQTSE 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00070 142 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 100 - -
Aip10g00070 142 Gene3D - 25 79 - -
Aip10g00070 142 PANTHER GLUTAMATE RECEPTOR 2 100 - -
Aip10g00070 142 SUPERFAMILY Periplasmic binding protein-like II 2 99 - -
Aip10g00070 142 Gene3D - 80 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00070 Aip-Chr10 647662 653110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00070 3 100 Ion Channels AT3G51480 66.327 7.44e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00070 K05387 - ahf:112782449 200.29