Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00068 GCCATATGTTGCTCGTACACCTACCTTTTCAGATGATGGAGCAGTTACACTTGGATCCAAGAGAAGCACTTTGTTTGAAGTTGATGCTAAAACCGGAAGGATCATTCAAACCCATAGTATGTCTGATTCTGATAATTCTTCTACATCTTGGAGTGATGACAAGAAGAGTGATACAGATATCCTTATAACAAAGAAAAAGGATCTTGCTAATCCTACGGAGCTGAATTCGCCGGAGTTGCTACTCAAGATATTTAGGACAGATTATTCTCTTCGATCTGTTGGTCCTAGTTCAGGAGTAGTTTTGTGGACTATGACTGTATCCGAATTCGAGGCTGTATTATTATGCCAACATACTTCATTTGATGCCGATGATGAGTATGTTTCTGACAGTGAGCTCGGTTTTGCGATGCCATATCCATGTCAAGAGATCCAACCAGTCTTTCGCTTGCGTAAGAATTTTATACTGGAACCCTCAATCACTGAAAGGTTACCTGGTTCTGATCATGAAAACAGTATGCTTTTGATGCCTGCGTCAGATTTGATGCTTCCTTCACAAGCAAATTTTGAAAAATTAAATGTCGATGATGGTAATATGATGCTTCCTGTGCCAATACCAAATTCTTTGCCTTCCCCGAAACCAAAAATTGTCTATCCAAGCCGAATGCATGAATGGTCAACACCATTACGTTTTATGATGCTTATGGTTTTGGGCTTTGTCCTCTATACTCTAGTGGTTAAAAGTAAAGATACGCCAAAGGATCAAAACCAGTCTGAATCGAAAATTTTGCCTGCTAAGAAAAAGAAGACACGTAAGTCAGGAAAGAACAATGTAGCAGTTGACAAAAAGGAAAAACATCTGTCCTCCGAAGATGAGGATATGCTGATGCGAAAGGATCTCGACGTAGAAGCAGGCGGGTGGATGCAATTTAACCAAATTGACCAAGGTGTTGACGGACGCAGGGTTGGTAAACTGCTTGTGTCAAATAAAGAAATTGCTAAGGGAAGCAATGGCACCATTGTCTTTGAGGGAATATATGAAGGTCGGGCAGTTGCTGTCAAGCGTTTGGTCAAGACTCATCATGATGTAGCATACAAAGAAATCCAAAATCTGATTGTATCTGATCATCACCCAAACATTGTTCGATGGCATGGGGTAGAATATGATCAAGATTTTGTTTACCTTGCTCTGGAACGATGTACATGCAGCTTGGATGATTTTATTCAAATTTATTCGGATATATCAGATAACCCTCTGCTTAGGAAGAACCAAGCTTTCAAGTCTTCTATTAAGGCCCAAATTGATATGGGGAAGGATAATATGCATGGTTTGTGGAAAGCCAATGGCTATCCATCACCTCTATTACTGAAATTGATGAGAGATGTCGTTTCTGGGATTGTTCATTTGCATGAACTAGGAATAATACATCGTGATTTGAAACCCCAAAATGTTTTGATAATCAAGGAAAGATCCTTGTGCGCAAAGCTTTCTGATATGGGCATTAGCAAACGCCTCCCTGAAGATATGTCTGCTTTGGGTCATAATGCTACTGGGGCTGGCAGTTCAGGTTGGCAAGCACCAGAACAACTTGGTCAAGGACGCCAAACACGGGCCGTAGATTTATTTAGCTTAGGTTGTGTCCTCTTTTTCTGCATGACTGGGGGGAGACATCCATTTGGAGAACGGCTTGAACGCGATGTTAATATTGTGAAAAACAGAATGGATCTTTTCTTAGTGGAGTTCATTCCTGAAGCAGAAGATCTAGTTTCTAGTTTACTGAACCCTAACCCTGATATAAGGCCAAAGGCAATTGAAGTATTGCACCATCCATTTTTTTGGAGTCCAGAAATGAGACTGTCATTTTTACGCGATGCCAGTGATAGAGTGGAACTAGAAGATAGGGAGACTAATTCTGTTCTTCTGAACGCATTAGAACGCATTGCTACAGTCGCATTAGGTGCGAAATGGGACGAAAAGTTGGAACCAGCCTTTCTTACTAACATTGGTCGATATCGACGGTACAAGTATGATAGTGTTCGAGACTTGTTGCGCGTCATGAGGAACAAGCTAAATCATTATAGAGAGTTGCCTCAAGAAATCCAGGAACTTGTGGGAACTGTTCCGGAAGGATTCAATGAATACTTTGCAAGCCGATTCCCAAGGCTATTAATCGAAGTGTATAAAGTTATATCCAAGTATTGCAAAGAAGAACAATGTTTTGATAGGTATTTCAAGAACCTTAATTAG 2245 0.4058 PYVARTPTFSDDGAVTLGSKRSTLFEVDAKTGRIIQTHSMSDSDNSSTSWSDDKKSDTDILITKKKDLANPTELNSPELLLKIFRTDYSLRSVGPSSGVVLWTMTVSEFEAVLLCQHTSFDADDEYVSDSELGFAMPYPCQEIQPVFRLRKNFILEPSITERLPGSDHENSMLLMPASDLMLPSQANFEKLNVDDGNMMLPVPIPNSLPSPKPKIVYPSRMHEWSTPLRFMMLMVLGFVLYTLVVKSKDTPKDQNQSESKILPAKKKKTRKSGKNNVAVDKKEKHLSSEDEDMLMRKDLDVEAGGWMQFNQIDQGVDGRRVGKLLVSNKEIAKGSNGTIVFEGIYEGRAVAVKRLVKTHHDVAYKEIQNLIVSDHHPNIVRWHGVEYDQDFVYLALERCTCSLDDFIQIYSDISDNPLLRKNQAFKSSIKAQIDMGKDNMHGLWKANGYPSPLLLKLMRDVVSGIVHLHELGIIHRDLKPQNVLIIKERSLCAKLSDMGISKRLPEDMSALGHNATGAGSSGWQAPEQLGQGRQTRAVDLFSLGCVLFFCMTGGRHPFGERLERDVNIVKNRMDLFLVEFIPEAEDLVSSLLNPNPDIRPKAIEVLHHPFFWSPEMRLSFLRDASDRVELEDRETNSVLLNALERIATVALGAKWDEKLEPAFLTNIGRYRRYKYDSVRDLLRVMRNKLNHYRELPQEIQELVGTVPEGFNEYFASRFPRLLIEVYKVISKYCKEEQCFDRYFKNLN 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00068 747 Gene3D KEN domain 615 747 IPR038357 -
Aip10g00068 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Aip10g00068 747 SUPERFAMILY Protein kinase-like (PK-like) 328 627 IPR011009 -
Aip10g00068 747 MobiDBLite consensus disorder prediction 249 291 - -
Aip10g00068 747 Pfam Ribonuclease 2-5A 617 743 IPR010513 GO:0004540|GO:0006397
Aip10g00068 747 SMART serkin_6 325 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00068 747 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 2 743 - -
Aip10g00068 747 SMART PGNneu 676 730 - -
Aip10g00068 747 ProSiteProfiles KEN domain profile. 614 745 IPR010513 GO:0004540|GO:0006397
Aip10g00068 747 ProSiteProfiles Protein kinase domain profile. 325 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00068 747 MobiDBLite consensus disorder prediction 36 55 - -
Aip10g00068 747 PANTHER IRE1-RELATED 2 743 IPR045133 GO:0004521|GO:0004674|GO:0030968
Aip10g00068 747 Pfam Protein kinase domain 328 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00068 747 MobiDBLite consensus disorder prediction 273 291 - -
Aip10g00068 747 Gene3D Transferase(Phosphotransferase) domain 1 439 613 - -
Aip10g00068 747 Gene3D Phosphorylase Kinase; domain 1 313 397 - -
Aip10g00068 747 CDD RNase_Ire1 615 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00068 Aip-Chr10 639880 643236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00068 351 610 MAP Kinase Kinase Kinase AT3G06030 26.894 9.75e-19 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Aip10g00068 Pkinase 1.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00068 K08852 - gmx:100788389 1071.61