Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00055 ATGTCAACTCATAACGCCACCCGCGACGGCAATAGACCCAATTCATTGGAAACATTGGTTCGCAATGGGGTGCCGATGAAGAACCACGATAGCTGGTGGATATTGTATGGTTTTGGAGCTATTATTGGAATCGCATTTTTTCCTGCAAGTTCCAACTTGAAGCATCTAATGGGAGGCTCAAAACAAGTACTGTGGAAAATCATTGTGTTCGTTATTGTCTGTGTTCCTGTGGTTGTTTTGCCATTTGTCCTTCATCGTTGGAAATCGCGAAGAGTGAACGATTCACCCAACCGGCGAAGAGTGAATGATTCACCCTATCGTAGTCAAATCAAAGCATGTGGTGTATTCGGGGCCCTGTTGCTGATCTATGTCTACACCTTCTTTTCTAGTCAAGGAGAAGAACGAGAACAAGAACACCACAATAAGACACCAAAAAGTAAGTTAGCATATGGTAGCGTATCGCTTTTTGGATTTGCTCTGATGGCGTTGGCTCTGTCAATTCAGACTAACTACGAATTTGTTAAAGAACTTATGGACTTCTTTGTGGAACTTCTTGTGGTGGAGCTCACCAAAATAAAATGGTATTATGGTTTCTTAGGAGCTCTGTTCAGTTTCTTGCTCCTCATTTTCCAATCGTGTAAAGAACCATCTGAAAGGGGCATCCCAATTAGTGCAGCGGATTTCCAACAGACTCCAAGCCGCATCAGCAACTCCACCCTTAGCCGCCGGTATACTAGAACAGATTCCTCGTCTCTAAACCCAGAGGAAGATCATGCCGGCGGAGGAATTGACAGCAACACTGCCTCCCTCTCGGGAGATACTACAAGGGATTCCTCGCCTCTAAGCCTACCAGAAGATCACGCCGGCAGAGATGTACATCACGATCCAATTGACAGCAACACTACCCCCCTCTTCCCAGATACTAGAACGGATTCCTCGCTTCTAAGCCCGACTCAAGATCGCATCATTGGTGCTCTTAATGAGAAGGATCAAGAACTTGCTGGGAAATTACGGAGTGGTTTGAGTACGTACATCAATGGTTATACCGAGGAGATTCCAAAGCCAATAATGGAAGACACCAACTTTATCAAGGATACGATTAAGCAGGCAGTTGAGGCTCTTCGCACAATAGTGACTGGTATAACAGCCAACGATGAAGGAGTGGAGGAATGGTTGGAGACGAAGTACAAATCCAGTCGGATACAGTTCTTGTTGATGTGCAAATCCAAGTTGGAACCGGACAAGGAGGCTACAGTGAGTGTGATCAAGAAGTGGATTAAACACTGCAACATAGCATTCAAGATACTAATTCCCAACGAAAGAGTGATGTGTGAAGAAATCTTTGGCGAATCCTCTCCCATCTCCGAACGGTGTTTTATGCACTTTTGCTGTCATGTCAAACAAGATATTTTGAGTTTTGTCCAAGATGATATGCCTACACTGATGAATTCTCCTGAAATAACGCTGGTTTTCACAACAGTGCGTGACCTAATTGTTCCAGAGTTCCATTATTTCCGGGATGATGATTTCCCTCCCCAAATTGACAAGTCTACTTCTTGTGAAGTTCATCCAATTACCATGAAAGTAATGCACCGCCTGGGTACTGCTTTTGAGAATAGGGACAACATTGAACCAATCCTCAAAGCATATCACAGTGACAAAGTTAGAGTTTTTAGGGGACGGTCTTGGATTACAAACTATATATATTGGAATGTGAAGGAGTATGAGGCCTCTTTAGAAGCCACCTTCAATAGTGCGTATGATTATGAATTGCGTGGTGTGTCTATCATGGCTAATGTTAATTACATATTAAAGAAGGCCTACGACTTTAGATTTGAATTAACTGAGGAGGATGATTGGGTCAAAGATCAAGCGTGGAAAATTCAAAGGTGCCGTAACCAATACTGGGACAAGCAGGCTGAGTTGCTGGGCTTTCTGAAGCAGCATAATGAGAATGCGACTCAAGCTTCAGTGAAGAAGATGCTATTTTCATTCGGTGAAAACATGTTTCTTGACAACAACACCTATGCTAATGACGAAGAACTAGAATTATCAATGGTCGAGTCCTTTATCCCAAATTGTGAAAGTCTCGTTAAGATATTCTGTGCTTTACTGAATGGCAATCAAGAAACAGAGATAGACGATACTGAATGGCAATCTTTTGAAGATGAAAGCCAAGATGATGAGACGCCGTTGCTTAGAGTTCGAGGTAGCTCTATTGCTTCGAGTTAG 2232 0.4306 MSTHNATRDGNRPNSLETLVRNGVPMKNHDSWWILYGFGAIIGIAFFPASSNLKHLMGGSKQVLWKIIVFVIVCVPVVVLPFVLHRWKSRRVNDSPNRRRVNDSPYRSQIKACGVFGALLLIYVYTFFSSQGEEREQEHHNKTPKSKLAYGSVSLFGFALMALALSIQTNYEFVKELMDFFVELLVVELTKIKWYYGFLGALFSFLLLIFQSCKEPSERGIPISAADFQQTPSRISNSTLSRRYTRTDSSSLNPEEDHAGGGIDSNTASLSGDTTRDSSPLSLPEDHAGRDVHHDPIDSNTTPLFPDTRTDSSLLSPTQDRIIGALNEKDQELAGKLRSGLSTYINGYTEEIPKPIMEDTNFIKDTIKQAVEALRTIVTGITANDEGVEEWLETKYKSSRIQFLLMCKSKLEPDKEATVSVIKKWIKHCNIAFKILIPNERVMCEEIFGESSPISERCFMHFCCHVKQDILSFVQDDMPTLMNSPEITLVFTTVRDLIVPEFHYFRDDDFPPQIDKSTSCEVHPITMKVMHRLGTAFENRDNIEPILKAYHSDKVRVFRGRSWITNYIYWNVKEYEASLEATFNSAYDYELRGVSIMANVNYILKKAYDFRFELTEEDDWVKDQAWKIQRCRNQYWDKQAELLGFLKQHNENATQASVKKMLFSFGENMFLDNNTYANDEELELSMVESFIPNCESLVKIFCALLNGNQETEIDDTEWQSFEDESQDDETPLLRVRGSSIASS 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00055 743 PANTHER PROTEIN, PUTATIVE-RELATED 149 647 - -
Aip10g00055 743 SUPERFAMILY Cullin repeat-like 370 636 IPR016159 -
Aip10g00055 743 MobiDBLite consensus disorder prediction 237 316 - -
Aip10g00055 743 Pfam Exo70 exocyst complex subunit 521 665 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aip10g00055 743 Pfam Exo70 exocyst complex subunit 423 475 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aip10g00055 743 MobiDBLite consensus disorder prediction 301 316 - -
Aip10g00055 743 MobiDBLite consensus disorder prediction 283 297 - -
Aip10g00055 743 PANTHER EXOCYST COMPLEX PROTEIN EXO70 149 647 IPR004140 GO:0000145|GO:0006887
Aip10g00055 743 MobiDBLite consensus disorder prediction 719 743 - -
Aip10g00055 743 MobiDBLite consensus disorder prediction 264 281 - -
Aip10g00055 743 Gene3D Exocyst complex component Exo70 309 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00055 Aip-Chr10 527222 532817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00055 396 701 EXO70 exocyst subunit family AT5G58430 25.745 7.61e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00055 - K07195 ahf:112784657 1461.43