Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00050 ATGCACTTGGTGTTGCGCCACACCATGACGCTTCCTACTGATTCGGAACCGCCACCACCTTCTCCTCCTCCACCGGATTCCGCCACCGACACCGCCACCGCCACAGAAAACGGAGCAACCACCACCACCCCCACCTCCTCCTCATCTTCCGAAAATCCACCGGATTCCCTGCCTACACCGCCGCAAGAGCTCCAACTCCCAATTTCATGGCCGCAAGACGGAACCTTGAGCGTCGAATGGATCCACAATCTGATGCAGTGCTTCGATTGGTCTTCGAGGAACTTTCCTCCTTCGGAGTTCCCTTCCGTTCTTCCCGTTCAGGTATTCGACTCTCTCATCCTCGTTGCTTCCAAGATGCTCCATAAGGAACCCAATTGCGTCACCGTTGATCCGTTTCGCCCTAATTCCGGCACGACGGCGTCGGTGGTGGTCGTTGGTGACGTTCACGGGCAGCTGCATGATCTGCTTTTTCTCCTCAAAGACGCAGGTTACCCTTCCGATGATCGAATCTTCGTCTTCAATGGTGATTACGTTGATCGTGGAGCTTGGGGGCTCGAAACTTTCATGCTCTTGTTAGCTTGGAAGGTGTTTATGCCTCATAATGTATATCTGCTACGTGGGAATCACGAATCAAAATACTGCACATCGGTCTATGGTTATGAGAAGGAAGTGATGGCAAAGTATGGTGATAAAGGTAAGCATGTGTATCGCAAATGCTTGGGATGCTTTGAGGGTCTTCCTTTGGCTTCCATTGTAGCAGGGTGTGTATTCACAGCTCATGGAGGACTCTTCCGCAGTGTAACAGTGACGCCATCAAAGAGATTAAAAGGGAAGAAGAACAGAAAGATTCATCTTAATCATGATAACAAAACTTTAACTCTTGGTTCCTTGGAAGAATTGTCTAAGGCCCGACGGTCAGTTCTTGATCCTCCTTGGGAAGGCCCAAACTTGATTCCTGGTGATGTTTTGTGGTCTGATCCATCGAAAAATCCTGGTCTTGCCCCGAACAAAGAGAGAGGCATTGGCTTGTTGTGGGGTCCCGATTGTACTGAAGAATTTTTGAAGAAGTATCAATTAAAGCTGGTCATCAGGTCTCATGAAGGTCCTGATGCTAGGGAAAAGAGGGATGGTTTAGATAGAATGTCTGAAGGTTACACTATTGATCATGTTGTGGATTCTGGAAAACTGATCACCCTCTTTAGTGCTCCAGATTACCCGCAATTTCAGGCAACAGAGGAGAGGTATAACAACAAAGGAGCCTATGTTGTTCTTGAACCCCCAAATTTTGACAATGCCATATTTCATGGATTTACAGCAGTTACTCCAAGGCCAAAGGTGAATGCCTATTATAATTTTGAAGAGGTGATAGATTCTGACGAAGAATTGGACTTGGAGTCCATGGTGACTTCTTGA 1413 0.4749 MHLVLRHTMTLPTDSEPPPPSPPPPDSATDTATATENGATTTTPTSSSSSENPPDSLPTPPQELQLPISWPQDGTLSVEWIHNLMQCFDWSSRNFPPSEFPSVLPVQVFDSLILVASKMLHKEPNCVTVDPFRPNSGTTASVVVVGDVHGQLHDLLFLLKDAGYPSDDRIFVFNGDYVDRGAWGLETFMLLLAWKVFMPHNVYLLRGNHESKYCTSVYGYEKEVMAKYGDKGKHVYRKCLGCFEGLPLASIVAGCVFTAHGGLFRSVTVTPSKRLKGKKNRKIHLNHDNKTLTLGSLEELSKARRSVLDPPWEGPNLIPGDVLWSDPSKNPGLAPNKERGIGLLWGPDCTEEFLKKYQLKLVIRSHEGPDAREKRDGLDRMSEGYTIDHVVDSGKLITLFSAPDYPQFQATEERYNNKGAYVVLEPPNFDNAIFHGFTAVTPRPKVNAYYNFEEVIDSDEELDLESMVTS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00050 470 ProSitePatterns Serine/threonine specific protein phosphatases signature. 205 210 IPR006186 GO:0016787
Aip10g00050 470 SMART pp2a_7 104 444 IPR006186 GO:0016787
Aip10g00050 470 MobiDBLite consensus disorder prediction 1 68 - -
Aip10g00050 470 Gene3D - 99 463 IPR029052 -
Aip10g00050 470 MobiDBLite consensus disorder prediction 13 27 - -
Aip10g00050 470 PRINTS Serine/threonine phosphatase family signature 141 168 IPR006186 GO:0016787
Aip10g00050 470 PRINTS Serine/threonine phosphatase family signature 171 198 IPR006186 GO:0016787
Aip10g00050 470 PRINTS Serine/threonine phosphatase family signature 204 228 IPR006186 GO:0016787
Aip10g00050 470 PRINTS Serine/threonine phosphatase family signature 241 267 IPR006186 GO:0016787
Aip10g00050 470 PRINTS Serine/threonine phosphatase family signature 301 328 IPR006186 GO:0016787
Aip10g00050 470 PRINTS Serine/threonine phosphatase family signature 395 411 IPR006186 GO:0016787
Aip10g00050 470 Pfam Calcineurin-like phosphoesterase 141 369 IPR004843 GO:0016787
Aip10g00050 470 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 39 467 - -
Aip10g00050 470 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 39 467 - -
Aip10g00050 470 CDD MPP_PP7 70 451 IPR041754 -
Aip10g00050 470 SUPERFAMILY Metallo-dependent phosphatases 101 440 IPR029052 -
Aip10g00050 470 MobiDBLite consensus disorder prediction 28 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00050 Aip-Chr10 482619 485963 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00050 67 361 Calmodulin-binding Proteins AT5G63870 69.595 1.67e-155 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00050 K04460 - gmx:100810695 776.548