Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00044 ATGACCATGGATATGCCGTCATCAATGGGAAGCAGATCTTCCTTTGGCTCTAGCAATGGCAATGAGGATACACCTGTTCACCCCTATGCTAATGTCTCTAATGGTGATGACTATGACAGTGATAGCTCCAATTTTGCTCCACACACACCATCAACTATGTCAATGGCTATTCCAGCAGAACTTGCTGGAGCTGTACCCTTAATTGACAAATTCCAGGTGGACGGATTTCTGAAATTAATGCAGAAACAAATCCATTCTGCTGGGAAACGTGGATTTTTCTCTAAAAAATCTGTAGGTCCTCAAACTCGAGAGAAGTTTACATTTGAGGACATGCTTTGTTTCCAAAAGGATCCAATACCAACATCATTGCTCAAGATAAATAGTGATTTAGTAAGCCGGGCAACAAAACTTTTCCAGATTATTCTGAAATACATGGGAGTTGATTCGTCTGATCGTGTAACTCCAATAAGCTTAGATGAACGAGTTGAGCTTGTTGCTAAGCTATATAAGCAAAGTTTGAAGCGTTCAGAACTTCGAGATGAACTTTTTGTTCAGATATCAAAACAAACAAGAAATAACCCTGAGAGGCAATACTTGATTAAAGCATGGGAGCTCATGTATTTATGTGCATCTTCCATGCCTCCTAGTAAAGATATAGGGGGTTATTTGTCGGAATATGTCCATAACGTAGCACATGGTGCAGCTACTGATTCTGAGATCCAAGCTCTTGCATTAAATACATTAAATGCTTTGAAGCGCTCTGTCAAGGCTGGTCCTAGGAACATAACACCCGGTCGTGAGGAGATTGAAGCTTTGATGACTGGGAGAAAGCTTACGACCATAGTGTTCTTCTTGGATGAAACTTTTGAAGAAATTACATATGACATGTCAACAACAGTTGCGGATGCTGTTGAGGAACTTGCAGGGCTTATTAAACTGTCAACTTATTCGACCTTTAGTCTGTTTGAATGTCACAAGGTCGTTACCGGCTCCAAATCATCCGACCCTGGGAATGGCATGTCCTTTTTTTATCTCTTCATGATTGAGTATGTCGGCCTTGATGATAACAAATATATTGGGGATCTCTTGGCGGAATTTAAAGCAGCAAAGGATCGAAGTAAGGGAGAAATATTGCACTGCAAACTGATATTCAAGAAAAAGTTATTCCGTGAGTCAGACGAAGCAGTGACGGATCCAATGTTTGTGCAATTGTCTTATGTTCAGTTGCAGCATGATTATATTTTGGGCAATTATCCTATTGGGAAGGATGATGCTGCTCAGCTTTCTGCATTACAAATCTTGGCTGAGATTGGATTTCTTAGCTCACCTGAAGCATCCACTGACTGGAATTCACTTTTGGAGCGATTCCTTCCACGACAAATTGCAATGACACGAGCAAAACGGGAATGGGAGATGGACATTCTTTCTCGTTATCATTCACTGGAGCATCTCAACAAAGATGATGCAAGACAACAATTTCTACGTATATTAAGAGCACTTCCTTATGGGAATTCTGTTTTCTTCAACGTTCGCAAGATTGATGATCCTATTGGACTCTTGCCTGGACGAATAATATTAGGAATTAACAAAAGAGGGATTCATTTTTTCCGTCCAGTTCCAAAGGAATATTTGCACTCCGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGTAATACGGCAGTATTTTTTAAAATGCGAGTTGCTGGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGGGAAGAAATTTGTGTAGCACTTCAAACACATATAAATGATGTAATGCTGCGCCGCTATTCAAAAGCACGGTCTGCTGCTACTGGTTCTTTGAATGGGGATATTTCTAATAATTTTAAGCCTCCTAACTTGGAGTTGTATGAGAAGCGTGTTAAAGATTTATCAAAGCTTGCTGAAGAATCGCAAAAAAATGTTGATCAATTGTATCAAGAATTGCATGAAAAGCAAAAACAAGAAGAGACGATGCAAGAAGAATTGGAGGGATTGAAAGAATCCTTAAATGCTGATAGGAAAAATCTCGAGGAAGTTTCGAATGATCGTGATAGACTTAGATCATTATGCAATGAAAAAGATAAGGCACTTCAGGCTGCAATTCTTGAGAAAAAGAACATGGAAGCAAAGATGGCCAAATTGAATAATCTAGTAATAGAGAATGCTGCCAAAAAGGAACTCATTGGAACAAATAACCAAGTCTCACAAAAGCTTGAAAGTGAACTAAAACTTTGTAAAGAGGAGTTGCAAGCAGCTGAAGAAACTATCAAAAGCTTAATGGATGAAAAAGTGATTTTGGCAGAGAAACTATCTGTGCTTGAGAAGAGAAGTTCTGAAGAGATTACGTCTCTTCAACGGAAACTTGAGCAAGAACGCAAGCTTACAAAGTCTCAAGTGTTTGAGCTTGAAAAGAAGCTAGAAGGGCTTAGACAAGAATTAGTGCTTGCAAAGTCTAATATTTCAATAAAGGACTCTGAGTTGGCTGCTTTGCAAAATAATTTGAAGGAATTAGAAGAATTGAGAGAATTGAAAGAGGACATTGATAGAAAGAACGAACAAACGGCTGCTATATTGAAGATGCAAGGGGCTCAACTAGTTGAAATGGAAGCGCTTTATAAGGAAGAACAAGTTTTAAGGAAACGTTATTATAATACAATAGAAGATATGAAAGGCAAGATTAGAGTTTATTGTCGGCTAAGACCTCTTAGCGAAAAGGAGATTGCCGAGAAAGAAAGACAGGCGCTTGCTGTGGTGGATGAGTTTTCGGTCGAGCATATGTGGAAAGAAGATAAGCCAAAGCAGTATGTATATGACCGTGTGTTTGATGGTGGTGCAAGTCAAGAGAGTGTATTTGATGATACAAAGTATTTGGTGCAATCTGCTGTGGATGGATATAATGTCTGTATATTTGCTTATGGTCAAACCGGTTCTGGAAAGACATTTACCATCTATGGAAGTGAAAACAACCCCGGACTTACCCCTCGTGCAACTGCCGAGCTTTTTAGAATTTTAAGGAGAGATAATAGCAAGTATGCCTTTTCGTTAAAGGCATACATGGTGGAATTATATCAAGATACCCTTATAGATCTTTTGTTACCTAAGAATGCAAAACATTCAAAGTTGGACATCAAGAAAGACTCGACGGGTATGGTGGCTGTGGAAAATGTAACAGTTCGGCCAATCTCTAAAATAGAAGATTTGAATAATATAATACAAAGAGGATCCGACCGGCGCCATACATCGGGTACACAAATGAATGAAGAAAGTTCAAGATCTCATCTCATTCTATCAGTTGTCATCGAGAGTACCAACCTTCAAAGTCAAGCAGTTGCAAGGGGAAAGTTGAGTTTTGTGGATCTTGCTGGTTCAGAAAGGGTGAAGAAATCGGGTTCAGTAGGTAGCCAACTCAAGGAAGCTCAAAGCATTAACAAATCGTTATCAGCACTTGGGGATGTGATTAGTGCTTTGTCTAATGGTGGTCAACACATTCCTTATAGGAATCACAAATTAACTATGTTAATGAGTGATTCCCTTGGTGGTAATGCTAAAACTCTCATGTTTGTAAATGTTTCTCCAGTGGCATCAAACTTAGACGAGACGCATAACTCGCTTATGTATGCATCGCGAGTGAGGTCAATAGTGAATGATCCTAGCAAGAACGTTTCTTCGAAAGAGATAGCACGACTGAAGAAGTTGGTTGCTTACTGGAAAGAGCAGGCTGGTAGAAGAACCGAGGATGAAGAATTGGAAGAAATTCAAGAAGAAAGACCAATTAAAGACAGGACAAGCTGGTAA 3810 0.3937 MTMDMPSSMGSRSSFGSSNGNEDTPVHPYANVSNGDDYDSDSSNFAPHTPSTMSMAIPAELAGAVPLIDKFQVDGFLKLMQKQIHSAGKRGFFSKKSVGPQTREKFTFEDMLCFQKDPIPTSLLKINSDLVSRATKLFQIILKYMGVDSSDRVTPISLDERVELVAKLYKQSLKRSELRDELFVQISKQTRNNPERQYLIKAWELMYLCASSMPPSKDIGGYLSEYVHNVAHGAATDSEIQALALNTLNALKRSVKAGPRNITPGREEIEALMTGRKLTTIVFFLDETFEEITYDMSTTVADAVEELAGLIKLSTYSTFSLFECHKVVTGSKSSDPGNGMSFFYLFMIEYVGLDDNKYIGDLLAEFKAAKDRSKGEILHCKLIFKKKLFRESDEAVTDPMFVQLSYVQLQHDYILGNYPIGKDDAAQLSALQILAEIGFLSSPEASTDWNSLLERFLPRQIAMTRAKREWEMDILSRYHSLEHLNKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAATGSLNGDISNNFKPPNLELYEKRVKDLSKLAEESQKNVDQLYQELHEKQKQEETMQEELEGLKESLNADRKNLEEVSNDRDRLRSLCNEKDKALQAAILEKKNMEAKMAKLNNLVIENAAKKELIGTNNQVSQKLESELKLCKEELQAAEETIKSLMDEKVILAEKLSVLEKRSSEEITSLQRKLEQERKLTKSQVFELEKKLEGLRQELVLAKSNISIKDSELAALQNNLKELEELRELKEDIDRKNEQTAAILKMQGAQLVEMEALYKEEQVLRKRYYNTIEDMKGKIRVYCRLRPLSEKEIAEKERQALAVVDEFSVEHMWKEDKPKQYVYDRVFDGGASQESVFDDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATAELFRILRRDNSKYAFSLKAYMVELYQDTLIDLLLPKNAKHSKLDIKKDSTGMVAVENVTVRPISKIEDLNNIIQRGSDRRHTSGTQMNEESSRSHLILSVVIESTNLQSQAVARGKLSFVDLAGSERVKKSGSVGSQLKEAQSINKSLSALGDVISALSNGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPVASNLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRRTEDEELEEIQEERPIKDRTSW 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00044 1269 CDD KISc_C_terminal 895 1220 - -
Aip10g00044 1269 Pfam FERM central domain 393 507 IPR019748 -
Aip10g00044 1269 PANTHER KINESIN-RELATED 618 1265 IPR027640 GO:0003777|GO:0007018
Aip10g00044 1269 Gene3D Kinesin motor domain 884 1220 IPR036961 -
Aip10g00044 1269 Pfam Kinesin motor domain 903 1218 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip10g00044 1269 MobiDBLite consensus disorder prediction 1 28 - -
Aip10g00044 1269 Gene3D - 505 612 IPR011993 -
Aip10g00044 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 897 1245 IPR027417 -
Aip10g00044 1269 Gene3D MyTH4 domain 93 274 IPR038185 -
Aip10g00044 1269 SMART MyTH4_1 114 273 IPR000857 GO:0005856
Aip10g00044 1269 Pfam MyTH4 domain 167 271 IPR000857 GO:0005856
Aip10g00044 1269 SUPERFAMILY PH domain-like 507 595 - -
Aip10g00044 1269 ProSiteProfiles MyTH4 domain profile. 114 273 IPR000857 GO:0005856
Aip10g00044 1269 Gene3D - 277 390 - -
Aip10g00044 1269 Coils Coil 740 865 - -
Aip10g00044 1269 PRINTS Kinesin heavy chain signature 969 990 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip10g00044 1269 PRINTS Kinesin heavy chain signature 1119 1137 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip10g00044 1269 PRINTS Kinesin heavy chain signature 1168 1189 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip10g00044 1269 PRINTS Kinesin heavy chain signature 1088 1105 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip10g00044 1269 Coils Coil 625 722 - -
Aip10g00044 1269 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 618 1265 - -
Aip10g00044 1269 CDD FERM_C_KCBP 504 610 - -
Aip10g00044 1269 Gene3D - 1221 1268 - -
Aip10g00044 1269 ProSitePatterns Kinesin motor domain signature. 1118 1129 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aip10g00044 1269 SUPERFAMILY Prismane protein-like 840 901 IPR011254 GO:0003824|GO:0016491
Aip10g00044 1269 MobiDBLite consensus disorder prediction 35 49 - -
Aip10g00044 1269 MobiDBLite consensus disorder prediction 1245 1269 - -
Aip10g00044 1269 SUPERFAMILY Second domain of FERM 385 502 IPR035963 -
Aip10g00044 1269 ProSiteProfiles Kinesin motor domain profile. 897 1218 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip10g00044 1269 Gene3D - 399 500 IPR014352 -
Aip10g00044 1269 MobiDBLite consensus disorder prediction 1 49 - -
Aip10g00044 1269 ProSiteProfiles FERM domain profile. 278 601 IPR000299 GO:0005856
Aip10g00044 1269 CDD FERM_B-lobe 402 500 IPR019748 -
Aip10g00044 1269 SMART B41_5 274 507 IPR019749 -
Aip10g00044 1269 SMART kinesin_4 895 1226 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00044 Aip-Chr10 410919 417731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00044 29 1265 Calmodulin-binding Proteins AT5G65930 73.179 0.0 1851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00044 - - adu:107475586 2321.97