Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04055 ATGAAAAGTGCTGCTTTTTCATTTCATTGCTATGGGGCTAGAGTTCTTGTTATGGTCTTGGGGTGTTTCATCAGTAGCTGCGTTTCTTCTAATCAGATTGGTTTGGGCTCGAGGTTATTGGCTAGTAAGGGACAAACATGGGTTTCTGATAATAATACATTTGCTTTTGGGTTCACAAAATCAGAGAATGATAATCGATTATTTCAGCTGGGCATTTGGTTTAATGAGCTTCCAGGAGATCCAACACTGGTTTGGTCACCTAACAGAGACTCTCCTGTATCCAAAGATGCAATGCTGGAGCTGGACACAACCGGCAACCTTGTCCTCATGGACGGAGACACCACCGTTTGGGCTTCAAACACCTCAGGTGCTGGTGTAGAAGCAGCAACCATGGAAGAATCCGGTAACTTCATTCTCCATGACAGTAGAAAAAACCTTGTGTGGCAGAGTTTTTTGCAACCATCTGACACACTCCTCCCAAACCAGCCCTTAACAGTTTCTTCAGAGTTAACCTCATCAAAGTCTTCCTCTCATGAAGGCTACTATGCTCTCAAAATGCTTCAACAGCCTACTTCTTTAAGCCTTGCCTTGACTTACAATCTACCTGAAACTTCCAAGGCTTCGGAGGAATCATACACCAACTATTCCTATTGGCAGGGTCCTGATATCTCGAATGTGACCGGAAAAGTTATAGCAGTTTTAGGCCAAGCCGGAAGCTTTAGAATTGTTTACGGAGATGCCTCTGATGGAGCAGTTTATGTTTATAAGAATGACAACGACGATGCAGGTTTGTCTGCTGCAGTTCACCAATCTACACAATTGACCGTTCTTCGAAGATTAACCCTGGAAAAGAATGGCAACTTGCGTTTGTATCGATGGGACGATGATGTAAATGGGTCGAGACAATGGGTGCCAGAATGGGCTGCAGTTTCAAATCCATGTGATATTGCTGGAATTTGTGGCAATGGAGTTTGTCATTTGGACAGAACCAAGACAAATGCCTCTTGCACTTGCTTGCCAGGAACTTCTAAAGTTGGCAAGGAAGGCCAGTGCTATGAGAATTCATCTCTTGTTGGAAAATGCAATTCAAGGCGCGAAAGCCAGACATCGCAGTTTAGGATTTCAACAGTGCAGCTAACAAATTATTACTATTCTGAATTTTCAGTGATAGCTAACTACAGTGATGTTGCTTCAGTATCAAAATGTGGGGATGCTTGCTTATCAGACTGCAACTGCGTTGCATCTGTTTATGGGCTAGATGAGGAGAGACCATACTGCTGGGTGTTAAGGAGCTTGGATTTTGGTGGTTTTGAGGATACTAGCTCAACCTTGTTTGTGAAGGTCAGAGCAAACAGCTCAGTGACACCATATGGCAAAGCTGGAGGGTCTAATAGCTCTTCGGATGGGATGGGGAGTGTGAAAGAGAAGGCTGTGATTATTCCAACTGTTCTGATCATGATGGTTCTCATTGTGCTGCTATGCTTATTGCTGTATTACAGTGTTCACAGAAAAAGAATGTTGAGAAGAGAAATGGAAAGTTCCATGATCTTATCAGGTGCTCCCATGAATTTCAGTTATCGCGATATGCAAATCAGGACTAGCAACTTTTCGCAGCTGCTAGGAACAGGTAGTGGATTTGGGAGTGTGTACAAAGGAAGCTTGGGAGATGGGACACTAATTGCAGTTAAGAAACTTGACAGAGTTCTGCCACATGGAGAGAGAGAATTTATTACTGAAGTGAACACCATTGGCTCAATGCATCATATGAATTTAGTTCGCCTATGCGGCTACTGCTCCGAGGGATTGCATCGGCTGCTAGTTTATGAGTTCATGAAGAATGGTTCCTTGGATAAGTGGATCTTCCCTTCATATGAAGCAAGAGATAGAGTACTAGATTGGCCAACACGGTTTTATATAGCTGTAGCTACTGCACAAGGGATAGCTTACTTTCATGAGCAGTGCAGGAACCGGATAATACATTGTGACATCAAACCTGAAAACATATTGTTGGATGAAAACTTTTGTCCTAAAGTGTCTGATTTTGGATTAGCCAAATTGATGGGAAGGGAGCACTCTCATGTGGTGACAATGGTAAGAGGGACAAGAGGTTATTTGGCACCAGAATGGGTTAGTAATCGCCCTATAACCGTAAAAGCCGATGTTTACAGCTATGGGATGCTTCTCTTAGAGATAATTGGTGGCAGGAGAAATCTTGATATGTCCTTTGATGCAGAGGATTTCTTCTATCCTGGTTGGGCTTACAAGGAGATGACTAATGGATCTACAATCGAAGTGGCAGATAGAAGACTAAATGGGGTGGTTGACGAAGAAGAGCTAATGAGAACTCTGAAAGTTGCATTTTGGTGCATCCAAGATGTGGTTTTCTTGAGACCAACAATGGGGGAAGTGGTGAGGATGCTAGAAGGATCAACCAACATTAACATGCCTCCAATGCCTCAGACAGTACTAGACTTAATTGAGGAAGGCTTAGAACATGTATATAAAGCCATGAAAAGAGAGTATAACCCTTCCAGCTCATCAACCATTACAAGCCATCTGACATCTCGAGCCACATGTAGCAATTCCACAATGTCACCAAGATAA 2604 0.4301 MKSAAFSFHCYGARVLVMVLGCFISSCVSSNQIGLGSRLLASKGQTWVSDNNTFAFGFTKSENDNRLFQLGIWFNELPGDPTLVWSPNRDSPVSKDAMLELDTTGNLVLMDGDTTVWASNTSGAGVEAATMEESGNFILHDSRKNLVWQSFLQPSDTLLPNQPLTVSSELTSSKSSSHEGYYALKMLQQPTSLSLALTYNLPETSKASEESYTNYSYWQGPDISNVTGKVIAVLGQAGSFRIVYGDASDGAVYVYKNDNDDAGLSAAVHQSTQLTVLRRLTLEKNGNLRLYRWDDDVNGSRQWVPEWAAVSNPCDIAGICGNGVCHLDRTKTNASCTCLPGTSKVGKEGQCYENSSLVGKCNSRRESQTSQFRISTVQLTNYYYSEFSVIANYSDVASVSKCGDACLSDCNCVASVYGLDEERPYCWVLRSLDFGGFEDTSSTLFVKVRANSSVTPYGKAGGSNSSSDGMGSVKEKAVIIPTVLIMMVLIVLLCLLLYYSVHRKRMLRREMESSMILSGAPMNFSYRDMQIRTSNFSQLLGTGSGFGSVYKGSLGDGTLIAVKKLDRVLPHGEREFITEVNTIGSMHHMNLVRLCGYCSEGLHRLLVYEFMKNGSLDKWIFPSYEARDRVLDWPTRFYIAVATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDMSFDAEDFFYPGWAYKEMTNGSTIEVADRRLNGVVDEEELMRTLKVAFWCIQDVVFLRPTMGEVVRMLEGSTNINMPPMPQTVLDLIEEGLEHVYKAMKREYNPSSSSTITSHLTSRATCSNSTMSPR 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04055 867 Pfam Protein kinase domain 537 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g04055 867 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Aip09g04055 867 MobiDBLite consensus disorder prediction 843 867 - -
Aip09g04055 867 ProSiteProfiles Protein kinase domain profile. 534 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g04055 867 Pfam S-locus glycoprotein domain 255 342 IPR000858 GO:0048544
Aip09g04055 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Aip09g04055 867 PIRSF SRK 1 860 IPR024171 GO:0004674
Aip09g04055 867 CDD STKc_IRAK 540 809 - -
Aip09g04055 867 SMART blect_4 38 154 IPR001480 -
Aip09g04055 867 PANTHER OS07G0415500 PROTEIN 15 867 - -
Aip09g04055 867 Pfam D-mannose binding lectin 82 169 IPR001480 -
Aip09g04055 867 Gene3D Phosphorylase Kinase; domain 1 498 610 - -
Aip09g04055 867 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 168 IPR036426 -
Aip09g04055 867 Gene3D Transferase(Phosphotransferase) domain 1 611 823 - -
Aip09g04055 867 Gene3D - 29 153 IPR036426 -
Aip09g04055 867 SUPERFAMILY Protein kinase-like (PK-like) 511 808 IPR011009 -
Aip09g04055 867 SMART serkin_6 534 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g04055 867 ProSiteProfiles Bulb-type lectin domain profile. 32 152 IPR001480 -
Aip09g04055 867 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 15 867 - -
Aip09g04055 867 CDD B_lectin 42 154 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04055 Aip-Chr9 146804839 146808516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g04055 479 817 Receptor kinase-like Gene Family AT5G20050 43.288 6.95e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip09g04055 Pkinase 2.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04055 - - aip:107616087 1711.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g04055 09 146804839 146808516 Aip09g04055 09 146804839 146808516 ECH