Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04047 ATGGAAGACCAGCCACCAACAAAGCCATCACCAACAGCTAAGACCTACAAGCTCACTGCCACTTCAATCTCCTACACTAAATCCACCACCACCACCACCACCACCTTTGCTGTACCACTCTTACTCTTCAAACACTGCACAACAACCCCACCAACCTACATCCTCAAAGAGGTCTCCTTAACTGCATACCCTTCTGAAATCCTTGCCATTGTTGGCCCAAGTGGTGCAGGAAAATCCACCCTCTTAGACATTCTCTCTGCTAGAACACTTCCATCACATGGAACTCTTGAACTCAACAATTCCCCTCTTATTCCTTCCACATTCAGAAAACTCTCAGCATATGTTCCACAACATGATGCATGCCTCCCTTTGCTCACAGTGTCCGAGACTTTTGCATTTTCAGCACACCTCCTCAAGCCTAAAACCTCTGACATTGCAGCCATAGTTTCTTCTCTTCTCAGTGAACTGAGGTTAACTCATTTGGCCAACACAAGGCTCTCTCATGGTCTATCAGGTGGAGAACATAGAAGAATCTCCATAGGCCTTAGTCTTCTCCATGATCCTGCAGTGTTGCTCCTTGATGAACCAACTTCAGGCCTTGACAGCACCTCTGCATTCAAGGTCATGCAGATTCTCAAATCCATTTGCGTTTCACGTCACAGGACAATTGTTCTCTCCATTCACCAACCAAGCTTCAAGATCCTCTCTTGCATTGATAGGATCTTGTTGCTATCCAAGGGTACTGTGGTCCACCACGGAAGCCTTGCATCACTTCAAGCATTCTTACACTCGAATGGCTTTACCGTGCCCCATCAACTCAATGCATTGGAATATGCAATGGAAATATTAAGTCAATTGAACGAGCTTAAGCCTATTACTCCACCAAGCATTCCTGAATCACCTGAAAGTTCATCAGCTGCAAGTTCCATATCTGATAACAATGGACATAGATCCAAAGAGATAATAAGGTACAAGAGCTCCAGAATCCATGAAATATGCACTCTATATGGCAGGTTTTGGAAGATAATATACAGAACAAGGCAACTCCTTTTAACAAACACCTTAGAGGCACTTCTTGTAGGGCTTGTTTTGGGAACAATTTACATCAACATAGGGTTTGATAAGGAAGGAATTGAGAAAAGGTTTGGTTTATTTGCATTCACCTTAACATTCCTACTATCTTCCACAACAGAAACCCTTCCAATCTTCATCAATGAGAGGCCAATCTTGCTTAGAGAAACATCAAGCGGGGTTTATAGGCTCTCATCATATCTCATTGCAAACACACTTGTTTTCTTGCCATACTTGCTTGTAGTTGCAATCATATACTCCATCCCAGTCTACTTCTTAGTTGGTTTATGTGCTTCTTGGATTTCTTTTGCTTATTTTGTTTTGGTCATTTGGGTAATTGTTCTCATGGCAAACTCCTTTGTGCTCTTCTTGAGTTCCCTGGCACCTAACTACATTGCTGGCACATCACTATTAACAGTGCTTCTTGCAGCATTTTTTCTGTTCTCTGGGTACTTCATCTCAAAGGAGAGTTTACCAAAGTACTGGCTTTTCATGCATTTTTTGTCCATGTACAAGTATGCACTTGATGCATTACTCATCAACGAGTACTCTTGTTTGGCCACAAGGTGTTTGATATGGTACCAAGAGAATCAAGTTTGTATGGTAACTGGGGGTGATGTGTTGCAGAAGAGGGGGCTCCAAGAAAGTCAAAAATGGACCAATGTTTACTTCTTGATTGGGTTCTTTGTGTTGTACCGTGTGCTTTGCTTGTTGGTTTTGATTAGAAGGGTTTCAAGGTCCAAAACTTGA 1821 0.4245 MEDQPPTKPSPTAKTYKLTATSISYTKSTTTTTTTFAVPLLLFKHCTTTPPTYILKEVSLTAYPSEILAIVGPSGAGKSTLLDILSARTLPSHGTLELNNSPLIPSTFRKLSAYVPQHDACLPLLTVSETFAFSAHLLKPKTSDIAAIVSSLLSELRLTHLANTRLSHGLSGGEHRRISIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMQILKSICVSRHRTIVLSIHQPSFKILSCIDRILLLSKGTVVHHGSLASLQAFLHSNGFTVPHQLNALEYAMEILSQLNELKPITPPSIPESPESSSAASSISDNNGHRSKEIIRYKSSRIHEICTLYGRFWKIIYRTRQLLLTNTLEALLVGLVLGTIYINIGFDKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLIANTLVFLPYLLVVAIIYSIPVYFLVGLCASWISFAYFVLVIWVIVLMANSFVLFLSSLAPNYIAGTSLLTVLLAAFFLFSGYFISKESLPKYWLFMHFLSMYKYALDALLINEYSCLATRCLIWYQENQVCMVTGGDVLQKRGLQESQKWTNVYFLIGFFVLYRVLCLLVLIRRVSRSKT 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04047 606 Pfam ABC-2 type transporter 331 540 IPR013525 GO:0016020|GO:0140359
Aip09g04047 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 262 IPR027417 -
Aip09g04047 606 Pfam ABC-2 type transporter 228 288 IPR043926 GO:0140359
Aip09g04047 606 MobiDBLite consensus disorder prediction 294 314 - -
Aip09g04047 606 MobiDBLite consensus disorder prediction 299 314 - -
Aip09g04047 606 SMART AAA_5 64 248 IPR003593 -
Aip09g04047 606 Pfam ABC transporter 55 198 IPR003439 GO:0005524
Aip09g04047 606 Gene3D - 42 289 IPR027417 -
Aip09g04047 606 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 271 IPR003439 GO:0005524
Aip09g04047 606 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 5 601 - -
Aip09g04047 606 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 5 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04047 Aip-Chr9 146749309 146751560 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g04047 48 265 Calmodulin-binding Proteins AT2G36910 28.333 7.91e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04047 K05681 - gmx:100790712 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g04047 09 146749309 146751560 Aip09g04047 09 146749309 146751560 ECH