Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04033 ATGCCTATACGGTGGGCAAATCCGTTCTCAAATTCAAAAGAAACCAAGAAGAAAGCAAGTAAGGAAAGTTTTATTGGCACACTGCATCGGAAATTTAAAACACCATCTGAAGGTAGATTAGGCAGTAGATCTGGAGGTCCTGGTAGACGCTGCAATGACACAATTTCAGAGATGGGGGATCGTTCTCCAGCTGAATCAAGATCTCCTTCGCCTTCCAAAGTGGCAAGATGTCAAAGTTTCGCTGAAAGGCCTCATGCTCAGCCATTACCACTTCCTGGTCTTCACCCTTCAAGTATAGGCCGAGTAGATTCTGAAATTAGCATATCATCAAAATCAAGACTGGAAAAGAGCTCCAAGCCATCATTCCTTCCACTTCCAAGACCTGCATGTATGCGAGGAAGGACAAATCCTTCAGATTTGGATGGAGATATGGTTGCTTCAATCTCCAGTGATGGTTCTGCTGATAGTGATGACCAAACAGAGTCACGCAACCGAAGTCCTTTGGCAACTGACACCGATACTGGGACTAGAACTGCTGCCGAGAGTCCTTCCAGCATGATGCTCAAGGATCAACCATCTGTTGTCTCCCAACTAAATTCAAGAGAAGCCAAAAAACCAGTGAACATTCTAAGTAATCATATGTCTTCTACTTCACCAAAACAGAGGCCTTTAAGGAACCATGTTCCGAATCTGCAAGTTCCCCCTCATGGTGCCTTCTATAGTGCTCCAGACAGTTCCTTGTCAAGCCCATCGAGAAGCCCATTGAGAGCGTTTGGCACAGATCAGGTGTTGAACTCTGCCTTCTCGGCTGGAAAGCCATACCCTGAGTTCAATTTAGCCGGTTCTGGCCACTGCTCTAGTCCAGGTTCCGGTCACAATTCTGGGCACAATTCAATGGGTGGGGACATGTCAGGACAGTTATTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCAGTTCCTAGTCCCAGAATGACTAGTCCTGGTCCTAGCTCTAGAATTCAGAGTGGAGCCGTCACACCTATTCATCCTAGAGCTGGGGGAACACCCACTGAATCACAGACAAGCTGGGCTGATGATGGAAAACAACAGAGTCATCGTTTGCCACTTCCTCCTTTGACAATTACCAATTCCTCGCCTTTCTCTCATTCCAATTCTGCAGCAACTTCTCCATCCATGCCAAGAAGTCCAGCTAGAGCGGAAAATCCAGTGAGCCCTGGCTCACGTTGGAAAAAAGGAAAGCTGATTGGCAGAGGCACATTTGGACATGTCTACGTCGGCTTCAATAATGATAGTGGTGAAATGTGTGCAATGAAGGAGGTTACCCTGTTTTCAGATGATGCCAAGTCTTTAGAGAGCGCTAAACAATTAATGCAGGAAATTTCTTTATTAAGTCGGCTTCGGCATCCAAATATTGTGCAGTACTATGGTTCTGAAACGGTAGATGACAAGCTTTACATATACCTGGAGTATGTATCCGGAGGCTCCATATATAAACTTCTTCAAGAATATGGACAGTTTGGTGAACTAGCTATTCGTAATTATACTCAACAAATTTTGTCAGGGCTTGCTTATCTGCATGCTAAGAATACTGTCCACAGGGACATCAAGGGTGCAAATATACTTGTAGATCCAAACGGCCGGGTCAAGTTGGCAGATTTTGGCATGGCAAAACATATAAAAGGGCAATCATGTCCATTGTCAATCAAGGGAAGCCCTTATTGGATGGCTCCTGAGGTTAAGAACACTAGTGGATGCAACCTTGCTGTGGATATATGGAGTCTTGGATGCACGGTTTTGGAAATGGCTACAACCAAGCCCCCTTGGAGTCAATACGAAGGGGTTGCTGCCATGTTCAAGATAGGTAATAGCAAGGAACTCCCAAAAATCCCAGATCACCTCTCAAATGAAGGAAAAGATTTTGTAAGGAGATGTCTACAACGTGATCCACATGATCGACCTTCAGCCAGTGAATTGTTGGAGCATGCTTTTGTGAAGTGTGCTGCACCTTTGGAAAGACCTATTCTGGGTCCTGAAGCATCAGACCCTCATCCTGCAATTACACAGGGAACAAAAACTCTGGGTATTGGACAAGGAAGGAATCTTTCTATCTTGGATTCAGATAGACTTGCTGTCCATTCTTCTAGGGCCTTGAAAACTAATCCTCATGCGAGTGACATCCATATTCCAAGAAATATATCTTGCCCTGTCTCTCCCATTGGAAGTCCACTTTTGAGGTCAAGATCACCACAGCACATGAATGGAAGAATGTCACCTTCTCCAATATCTAGTCCACGGACTGCTTCTGGTGCATCGACGCCTCTCACAGGCGGCAACGGTGCCATTCCATTCAGCAACCAATTAAAACAGTCAGTTTACTTTCAAGAGGGTCTTGTAAGCATGCCCAAGTCCCCAAATGGTGTCTACATCAGTGGCTCTGCACATAATGACTCAAATGTTGACATTTTTCGTGGAATGCAAATGGGGTCTCACATTACCTCAGAACTAGTTCCCAGTGAAAATGATATTCTGGGTAAGCAGTTCACAAGGCCATCTCATCCTGAGCCATATGATTTTCAATCAGTCTTGGCGGATCGTGTTGGCCGGCAGCTGCTGCGGGACCACGTGAAGATTAACCCATCCCTTGATCTAAATCCCAACTCCACTTTGCTGAGCCGAGGAAATGGTTTGTAA 2697 0.4546 MPIRWANPFSNSKETKKKASKESFIGTLHRKFKTPSEGRLGSRSGGPGRRCNDTISEMGDRSPAESRSPSPSKVARCQSFAERPHAQPLPLPGLHPSSIGRVDSEISISSKSRLEKSSKPSFLPLPRPACMRGRTNPSDLDGDMVASISSDGSADSDDQTESRNRSPLATDTDTGTRTAAESPSSMMLKDQPSVVSQLNSREAKKPVNILSNHMSSTSPKQRPLRNHVPNLQVPPHGAFYSAPDSSLSSPSRSPLRAFGTDQVLNSAFSAGKPYPEFNLAGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPTESQTSWADDGKQQSHRLPLPPLTITNSSPFSHSNSAATSPSMPRSPARAENPVSPGSRWKKGKLIGRGTFGHVYVGFNNDSGEMCAMKEVTLFSDDAKSLESAKQLMQEISLLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQEYGQFGELAIRNYTQQILSGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHIKGQSCPLSIKGSPYWMAPEVKNTSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPKIPDHLSNEGKDFVRRCLQRDPHDRPSASELLEHAFVKCAAPLERPILGPEASDPHPAITQGTKTLGIGQGRNLSILDSDRLAVHSSRALKTNPHASDIHIPRNISCPVSPIGSPLLRSRSPQHMNGRMSPSPISSPRTASGASTPLTGGNGAIPFSNQLKQSVYFQEGLVSMPKSPNGVYISGSAHNDSNVDIFRGMQMGSHITSELVPSENDILGKQFTRPSHPEPYDFQSVLADRVGRQLLRDHVKINPSLDLNPNSTLLSRGNGL 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04033 898 MobiDBLite consensus disorder prediction 14 37 - -
Aip09g04033 898 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 10 812 - -
Aip09g04033 898 MobiDBLite consensus disorder prediction 348 363 - -
Aip09g04033 898 MobiDBLite consensus disorder prediction 284 412 - -
Aip09g04033 898 CDD STKc_MEKK1_plant 410 666 - -
Aip09g04033 898 MobiDBLite consensus disorder prediction 745 783 - -
Aip09g04033 898 MobiDBLite consensus disorder prediction 102 117 - -
Aip09g04033 898 MobiDBLite consensus disorder prediction 59 75 - -
Aip09g04033 898 MobiDBLite consensus disorder prediction 1 254 - -
Aip09g04033 898 ProSiteProfiles Protein kinase domain profile. 411 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g04033 898 Pfam Protein kinase domain 412 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g04033 898 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Aip09g04033 898 SUPERFAMILY Protein kinase-like (PK-like) 409 745 IPR011009 -
Aip09g04033 898 SMART serkin_6 411 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g04033 898 Gene3D Transferase(Phosphotransferase) domain 1 409 681 - -
Aip09g04033 898 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 10 812 - -
Aip09g04033 898 MobiDBLite consensus disorder prediction 370 397 - -
Aip09g04033 898 MobiDBLite consensus disorder prediction 284 313 - -
Aip09g04033 898 MobiDBLite consensus disorder prediction 165 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04033 Aip-Chr9 146645871 146650712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g04033 9 887 MAP Kinase Kinase Kinase AT1G63700 58.937 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip09g04033 Pkinase 6.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04033 K20717 - gmx:100792783 1407.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03877 05 146952303 146956149 Aip09g04033 09 146645871 146650712 ECH
Aip09g04033 09 146645871 146650712 Aip09g04033 09 146645871 146650712 ECH
Aip09g04033 09 146645871 146650712 Aip05g03877 05 146952303 146956149 PCT