Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04019 ATGGAATTTTTAGGGTTACTTGTTGCCCTATTGGCATCATTTTGCTTCCTGTTGATGTTGATACTAACATATGCATGGTGGGTTTCCCCATTTCTAACACATAACAAGCTTAAGAGATGTGGATTTGGAGGGCCAAACCCAGGTTTCCCACTTGGAAACCTCAAAGAGATGAACAATAAAAAGAATATTAAATCTTCCTCATCATCATCAACCCATGATATACACTCACAAGTTTTTCCCTACTTCTCTTGCTGGCAGAAATCTTATGGTAAGGTATTTGTTTATTGGCTAGGGACGGAGCCATTCTTGTACATTGCGGACGCAGAGTTGTTGAAGAGAATATCCACGGAGGTGATGGCCAAGAGATGGGGGAAGCCAAGTGTGTTTAGAAATGACAGAGACCCCATGTTTGGGAGTGGCTTGGTCATGGTTGAAGGCAACGATTGGGTTCGTCATCGCCACATTGTTGCACCCGCATTCAATCCCATTAATCTCAAGGCGATGGCAAGCGTGATGAGTGAGTCGACAAACGAAATGATATCTCGATGGAGCAGCCAAATTAAGATCGGAAAACACGAAATCAACGTTGAGAGTGAGGTCATAACCCTCGCCGGAGAGATCATCGCCCGAACTATCTTCGGCTTGAAAGACGAGAGCGCTAGAGGCATTTTCGACAGGCTCAGCGCCCTTCAAATGACTCTCTTCAACACCAACCGCTACGTCGGGGTTCCATTCGGCAAGTACTTCAAGGTCAAGAAAACCCTAGAGGCCAAGAAATTAGGCGAAGAAATCGACCAGCTCTTGTTATCTATCATTGAAGCTCGCAAGGCCTCGCCCAACCCCAAGGGTTCTCAGAACGATTTGCTGTGTTTGCTGCTCCAAGAAAACAATCATGATGGTACTGGCAAGGAGCTCACGACGAGGGAGCTTGTTGATGAATGCAAGACGTTCTTTTTCGGCGGCCATGAAACCACTGCGCTTTCTCTCACCTGGACTTTGCTGCTGCTCGCTATGCATCAAGATTGGCAGAACCAATTGAGACATGAGATTCAACAACTTCTTGCTCAACACAATCACGTTATTGATCTCGCCATGCTCTCTAGCTTAACCAAGATGAAGTGGGTGATGAATGAAGCTCTAAGGTTGTACCCTCCTTCACCAAATGTGCAAAGGCAAACAAGAGACGACATTCAAATTGATGGTTTAACAGTGCCTAAAGGAACCAACATGTGGATCGATGTGGTGGCCATGCACCATGACCCGGAGCTATGGGGACACGATGCTAATGAGTTCAAGCCAGAGAGGTTCATGGAGGATGTGAACGGTGGATGCAAACACAAGATGGGTTACTTGCCATTTGGATTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGGCATTCATGGAGTACAAGATTGTGTTAACTCTACTTCTCTCTAAGTTTAGTTTCAACATTTCTCCAACTTACCATCACTCACCATCTATCATGCTTTCTCTAAGGCCTGCCCATGGAGTCCCACTCATAGTTCAGCCCCTTTAG 1539 0.4587 MEFLGLLVALLASFCFLLMLILTYAWWVSPFLTHNKLKRCGFGGPNPGFPLGNLKEMNNKKNIKSSSSSSTHDIHSQVFPYFSCWQKSYGKVFVYWLGTEPFLYIADAELLKRISTEVMAKRWGKPSVFRNDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKAMASVMSESTNEMISRWSSQIKIGKHEINVESEVITLAGEIIARTIFGLKDESARGIFDRLSALQMTLFNTNRYVGVPFGKYFKVKKTLEAKKLGEEIDQLLLSIIEARKASPNPKGSQNDLLCLLLQENNHDGTGKELTTRELVDECKTFFFGGHETTALSLTWTLLLLAMHQDWQNQLRHEIQQLLAQHNHVIDLAMLSSLTKMKWVMNEALRLYPPSPNVQRQTRDDIQIDGLTVPKGTNMWIDVVAMHHDPELWGHDANEFKPERFMEDVNGGCKHKMGYLPFGFGGRMCVGRNLAFMEYKIVLTLLLSKFSFNISPTYHHSPSIMLSLRPAHGVPLIVQPL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04019 512 Pfam Cytochrome P450 76 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g04019 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Aip09g04019 512 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g04019 512 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g04019 512 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g04019 512 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g04019 512 Gene3D Cytochrome P450 27 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g04019 512 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g04019 512 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g04019 512 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g04019 512 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g04019 512 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g04019 512 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g04019 512 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 4 507 - -
Aip09g04019 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 507 - -
Aip09g04019 512 SUPERFAMILY Cytochrome P450 74 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04019 Aip-Chr9 146531521 146534320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g04019 17 512 Cytochrome P450 AT5G52400 56.064 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04019 - - gmx:100802882 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g04019 09 146531521 146534320 Aip09g04019 09 146531521 146534320 ECH
Aip09g04019 09 146531521 146534320 Aip05g03862 05 146835299 146841568 PCT