Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04012 ATGGCGTTGGGCGTAACCGCCGTTCCCTTCACATACGTCGTTCACGTCCTTGGTCTGGTTGCCATCATCTTCGTCCTCGTCTGGAACATTCACTTCAGGGGTGGCTTGGCCTGGGACGCCGATAACAAGAACCTCATCTTCAATCTCCATCCTGTTCTTATGATACTTGGCTTGATATTTCTTGGTGGTGAAGCTATCATAAGTTACAAATCTCTTCCTTTGAAGAAGGAAGTGAAGAAAGTGATACACCTTACTCTCCATGCAATTGCATTAGCACTTGGAATATTTGGAATCTGTGCTGCTTTCAAGAATCATAATGAAAGTGGGATTGCCAATCTCTACAGCTTGCATTCATGGCTTGGAATTGCAGTTATTTCCCTCTATGGCATTCAGTGGCTATATGGGTTTGTGATCTTCTTCTTCCCTGGTGGAACTCCGGCCATTAGACGCGAATCACTACCTTGGCATGTTCTATTTGGACTATTCGTGTATGTATTGGCTATTGGCACTGCTTCTCTTGGGTTTTTGGAGAAACTCACTTTCTTGGAGAACTCAGGATTGGCAAAATATGGCTCTGAGGCATTACTTGTCAACTTCACTGCTGTGATCACAATCTTATTTGGTGCTTTTGTTGTATTATCTGCTTTATCTGATGCTCCACCTGCAGAAGATGACTATGCACCCATTTAG 690 0.4377 MALGVTAVPFTYVVHVLGLVAIIFVLVWNIHFRGGLAWDADNKNLIFNLHPVLMILGLIFLGGEAIISYKSLPLKKEVKKVIHLTLHAIALALGIFGICAAFKNHNESGIANLYSLHSWLGIAVISLYGIQWLYGFVIFFFPGGTPAIRRESLPWHVLFGLFVYVLAIGTASLGFLEKLTFLENSGLAKYGSEALLVNFTAVITILFGAFVVLSALSDAPPAEDDYAPI 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04012 229 CDD Cyt_b561_ACYB-1_like 40 183 - -
Aip09g04012 229 PANTHER CYTOCHROME B561-RELATED 1 225 IPR043205 GO:0016491
Aip09g04012 229 ProSiteProfiles Cytochrome b561 domain profile. 13 216 IPR006593 -
Aip09g04012 229 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 1 1 225 - -
Aip09g04012 229 SMART 561_7 49 175 IPR006593 -
Aip09g04012 229 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Aip09g04012 229 Gene3D - 2 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04012 Aip-Chr9 146484059 146486646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g04012 1 218 Chloroplast and Mitochondria Gene Families AT4G25570 72.018 1.44e-113 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04012 K08360 - gmx:100306179 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g04012 09 146484059 146486646 Aip09g04012 09 146484059 146486646 ECH