Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03976 ATGCACGCGCACAAAAGTATATTGGCAAATTGGCAAATTGTTACAAATGGCCAGCAAGGGCCACAGGGAAAGTGGATACGCAGTAAATCTAAGTTCACTACGTGGCACAATGTAGAGGCTCAGATCATAAGTAGAGAAATTTCAGCCGTTGATTTGGGGTTCTCAACTTCTCATCCGTTGCTATTCGCTAGGTGCCAGAAAGCTTCAAACCGCAGTCAACGTATCAAAGAAGAAGAAGAAGAAGAAGAGATGGAAGCGAATCATGGCGGTTTCAGCGAAGAACCGAACGACACTCAAAGCGCCGACGTATCACCCTCTGAGACAACGCCAATAGCGAAAGCGCCGGAACCTAGGTTCCCGGAGCCGGTACCTCCGTCTCCGGTGGCGGTGCCTATGAAGGAGGAGCTCGCGGACTCCGAGAAGAGCCTTGAGGAGCGTCTCCAGGTGGCGATTGTTCCCACGCCGGTGGCAAGGAGGCCGTCGAAGGACCGCCACACGAAGGTAGAGGGGCGCGGCCGGAGAATCCGGATGCCGGCGACGTGCGCCGCCAGGATCTTCCAGCTGACACGGGAGTTAGGCCACAAGTCCGACGGGGAAACAATACGGTGGCTGCTGGAACAGGCTGAGCCGGCCATCATCGAGGCCACCGGTACAGGAACGATCCCGGCGATCGCGGTTTCGGTGGGCGGCACACTCAAGATCCCAACGACGTCGACGGCGACGCCACAAGGCGAAGAAGAGGCGTCGAGAAAACGAAGAAGAAGGGCATCGAACAGCGAGTTCATTGATGTGAATGAAGAACAATCCTCAGTGTCTTCGGGTCTCGCACCAATCACACAAACCGCATACGGCGGTAGTTCTAGTGGTGGTGGACTCGTTCCAATGTGGACTATTGGTGGCGGTGGTGGTGGTTCTAATGGTCCTTTTTTCATGTTCCCAAATGCTGCTGCTACTTCTTCCGGGGATGGTGTTGCGAACCATCCTCATTATTGGGCTTTTCCAGCGAATGCGGCGCCGTATTTCAACGTTCAAGCTCGGCCTATTTCGGGGTTTGTTGCGGCTGAGCAATTAGGCCATGTGGTAGTGCAGCAGCAGCAGCCGCAGCCGCCGCCGCCGCCGCCGCCGCCGCCTAGTTGTTGTTCTTCTAATGGCTCTGCTAACTCTTGTTCTACTCTGGCTCCTAGTTTGAGCTCTGGAACCAGTGCTACTAATAATGGCTCTACTTCTACTTCTAGTGCTGCCACTCAGATGCTTAGGGATTTCTCTTTGGAGATTTACGACAAGAAAGAGTTGCAATTCTTGGCTTGCTCTTCCTCTTCTTCTGCCGTTGCTGAAGCTAAGTTGGAACAACCACCACCTCACACTCACAGTTCTAAGCCTTCAAACTGA 1389 0.5385 MHAHKSILANWQIVTNGQQGPQGKWIRSKSKFTTWHNVEAQIISREISAVDLGFSTSHPLLFARCQKASNRSQRIKEEEEEEEMEANHGGFSEEPNDTQSADVSPSETTPIAKAPEPRFPEPVPPSPVAVPMKEELADSEKSLEERLQVAIVPTPVARRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEQAEPAIIEATGTGTIPAIAVSVGGTLKIPTTSTATPQGEEEASRKRRRRASNSEFIDVNEEQSSVSSGLAPITQTAYGGSSSGGGLVPMWTIGGGGGGSNGPFFMFPNAAATSSGDGVANHPHYWAFPANAAPYFNVQARPISGFVAAEQLGHVVVQQQQPQPPPPPPPPPSCCSSNGSANSCSTLAPSLSSGTSATNNGSTSTSSAATQMLRDFSLEIYDKKELQFLACSSSSSAVAEAKLEQPPPHTHSSKPSN 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03976 462 Coils Coil 65 85 - -
Aip09g03976 462 MobiDBLite consensus disorder prediction 245 261 - -
Aip09g03976 462 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 96 439 IPR005333 GO:0003700
Aip09g03976 462 MobiDBLite consensus disorder prediction 115 129 - -
Aip09g03976 462 MobiDBLite consensus disorder prediction 233 270 - -
Aip09g03976 462 Pfam TCP family transcription factor 161 246 IPR017887 -
Aip09g03976 462 ProSiteProfiles TCP domain profile. 161 215 IPR017887 -
Aip09g03976 462 MobiDBLite consensus disorder prediction 92 107 - -
Aip09g03976 462 MobiDBLite consensus disorder prediction 365 380 - -
Aip09g03976 462 MobiDBLite consensus disorder prediction 67 141 - -
Aip09g03976 462 MobiDBLite consensus disorder prediction 381 413 - -
Aip09g03976 462 MobiDBLite consensus disorder prediction 442 462 - -
Aip09g03976 462 PANTHER TRANSCRIPTION FACTOR TCP9 96 439 - -
Aip09g03976 462 MobiDBLite consensus disorder prediction 363 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03976 Aip-Chr9 146177642 146179360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03976 155 434 TCP Transcription Factor Family AT5G51910 48.621 8.30e-70 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip09g03976 TCP 1.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03976 - - aip:107617519 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03976 09 146177642 146179360 Aip09g03976 09 146177642 146179360 ECH