Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03965 ATGCACAAGAAATGTTTCTGTTGTTTTCTATCTGAAGAAGAGCAAAGCAAAGCAAGGAATAATAAAGGAGAAAAGAATAAGAATAAGGATTATCCATGGGAAATCTACACATCGAAGGAGCTGCTTCGTGCAACAAACAATTTTCACCAAGATCACAAGATTGGAGAAGGTGGATTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGCGTCGAGATTGCAGTGAAGCGGTTGAAAACGATGACTGCAAAAGCAGAGATGGAGTTCGCAGTTGAAGTGGAAGTACTTGGAAGGGTTAGGCATAAGAATCTGTTGGGTTTGAGAGGTTTCTACGCTGGAGGAGATGAAAGGTTAATTGTTTATGATTTCATGCCTAATCAAAGCTTGCTCACACATTTGCACGGTCACCTTTCTTCTAATTGTCTCTTAGATTGGCCTAAAAGAATCAACATAGCAATTGGTGCAGCTGAAGGTTTAGCGTATTTGCACCATGAGGCAAATCCTCACATCATACACAGAGACATAAAAGCAAGCAATGTTCTGTTAGACCTTGAATTCCAAGCCAAGGTAGCTGATTTCGGTTTCGCAAAGCTCATACCAGAGGGTGTGAGCCATCTCACAACAAGGGTTAAAGGGACACTCGGATATTTGGCACCGGAATATGCCATGTGGGGTAAAGTGTCGGAGAGTTGTGATGTTTACAGCTTTGGGATTCTTCTTTTGGAGATTGTTAGTGCCAAGAAACCAATTGAGAAGCTACCAGGTGGAGTGAAAAGGGACATTGTTCAATGGGTGACACCTTATTTCCAAAAGGGTGCGTTCAATCACATTGCGGATTCCAAGCTGAAGGGGAAGTTTGATTTGGATCAGTTGAAATCTGTGGTGATGATAGCTCTGAGATGCACCGATGGTAGCCCTGAGAAGAGGCCTAGCATGGCAGAGGTTGTGGATTGGCTTAAGGGTGCAGCTGGCAAGAGAAGAAGAGAGGTTACTCCTTCTCTAAGTTTGGGTAATGGTGATGATGAAGTGGATGACGATGATTACGGAGAGATTACACCATACCAATCCAAGTTGAAAATGGCAAGTACTGATAGTGATAGGCATAAGAGAAGATGA 1116 0.4283 MHKKCFCCFLSEEEQSKARNNKGEKNKNKDYPWEIYTSKELLRATNNFHQDHKIGEGGFGSVYWGRTSKGVEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDFMPNQSLLTHLHGHLSSNCLLDWPKRINIAIGAAEGLAYLHHEANPHIIHRDIKASNVLLDLEFQAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIVSAKKPIEKLPGGVKRDIVQWVTPYFQKGAFNHIADSKLKGKFDLDQLKSVVMIALRCTDGSPEKRPSMAEVVDWLKGAAGKRRREVTPSLSLGNGDDEVDDDDYGEITPYQSKLKMASTDSDRHKRR 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03965 371 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Aip09g03965 371 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 335 - -
Aip09g03965 371 ProSiteProfiles Protein kinase domain profile. 48 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03965 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Aip09g03965 371 MobiDBLite consensus disorder prediction 325 371 - -
Aip09g03965 371 PANTHER OS01G0253100 PROTEIN 4 335 IPR045271 GO:0004714|GO:0006468
Aip09g03965 371 SUPERFAMILY Protein kinase-like (PK-like) 30 332 IPR011009 -
Aip09g03965 371 CDD STKc_IRAK 54 321 - -
Aip09g03965 371 Gene3D Phosphorylase Kinase; domain 1 9 123 - -
Aip09g03965 371 Pfam Protein kinase domain 48 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03965 371 SMART serkin_6 48 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03965 371 Gene3D Transferase(Phosphotransferase) domain 1 124 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03965 Aip-Chr9 146099491 146101274 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03965 19 342 Receptor kinase-like Gene Family AT5G45780 41.791 2.33e-81 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Aip09g03965 Pkinase 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03965 - - gmx:100817283 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03965 09 146099491 146101274 Aip09g03965 09 146099491 146101274 ECH