Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03962 ATGCCATCACGCCACCTGTCCACGTCATCGCCACCAAACAAACCCCAAAACCATGTCTTCTCCTCCGCCTCCTCTTTCTTCGTCCTCTTCTTCCTCTGCCTTCGAAACCCAACAAGGAAGAAGAACCGGACAACTCCTTCTTCTGACTCCGACTCCAACCCTCCTCACCGCTTCTCCTACTCCCTCCTCCGCCGCGCCACCAACTCCTTCTCCACCATCCTCGGCCATGGAGGCTTTGGCCCTGTCTTCTCCGCCTCCCTCGCCGGAAAACCCCTCGCCGTTAAGCTCATGGACTCCTCTGCATCCCTCCAAGGGGAGCGCGAGTTCCACAACGAGCTCCTCTTCGCTTCCAGGCTCCTCCGTTCATCCTCCTCCTCCACGTGCCGTCACGTGGTCCCTGCTATAGGGTTCGCCTCCGACCCCAAACGGCGCCGTTTCCTCATCGTGTACGACCTCATGCACAACGGCAACCTCCACGACGCACTCCTCCGCCGAAAATCCCCTGAGCTCATGCGATGGCAGACGAGATTCTCCGTCGCACTGGACGTCGCGAGAGGGTTACAGTTTCTTCATTCCTGCGACCCTCCGGTGATTCACGGCGATATCAAGCCCAGTAATGTTCTCTTGGACCGGTCCTTTGCGGCCAAGATAGGAGACTTTGGACTTGCGAGGTTCAAGACGGAGAACAGGTTGGAAGCTGAGGCTTTGGGGTGCGAGAGTGACGGTGCCTCTGTTTTTGAGGAGCAATCTCCGGAAGGACCAATTCCATCGCCTGATGCAGTTGTGAAGAAAAATGGGAAGGGTGTGGGGGGCAATTTGGTAAATGAAGAGAACGGAGGTTCATCGGGTGCTGTGTTGAAGGATTATGTGATGGATTGGATTGGGAATGACGTTGGAATGCAGAGACCCAAAGCTGAGTTGACTGCTTCTGCTTCTGCTGCTTCTACCAGTGCAAAGGATGAGATCAACAAGAAGAAGAAGAAGAATAATAGCAGTAGTAGTAGGAGGAAACTGGAATGGTGGGAATCTATGGATGAGGACGGTGATGTTTTGAAGAAGCAGAGAAGAAGGCCTGTGAGGGAATGGTGGAAGGAGGAGTATTCTCAAGAGCTTGCTAGCAAGAAGAAAAAGAAAAACAAAAAGAAGAAAGAAAAGGATAGAAATGGTGCAGAGAGAGAGAGTGATGAGTGGTGGTTCAGGGAGATTAAGAAAAGCGGTAGCAGGAACAGCGTAGATTCATGGGTAGATGATGGTGAAATCCCCAAGAGTGGCGCTATGAGCAGCAACCAAAGCATGAGAGGGACGGTGTTCTATGTTGCTCCAGAGTGTGGTGGCGATGCGTCGGAGAAGTGCGATGTGTACAGTTTCGGGGTGTTATTGCTTGTAATAGTGTCTGGGAGGCGTCCATTGGAGGTGACTACTGGTTCACCATTGTCGAGCAGTGAGTTTCAGAGAGCGAATCTTGTGTCGTGGGGTCGCCATTGCAGCCGCAAAGGGAAGCTGCTTGATCTTGTTGATGAATCCATTCAGGGTTTGGATAAAGAGCAGGCTCTGCTCTGTATCAAGGTTGCGTTGCTCTGTTTGCTCAAGTCACCGTCTCGTCGTCCTTCAATGAAAGAGGTTGTTGGGATGCTTAGTGGGGAATTGGACCCATCTCAATTGCCCCTTCACTATTCATCTTCATCATCCACTCAACAGTAG 1701 0.5209 MPSRHLSTSSPPNKPQNHVFSSASSFFVLFFLCLRNPTRKKNRTTPSSDSDSNPPHRFSYSLLRRATNSFSTILGHGGFGPVFSASLAGKPLAVKLMDSSASLQGEREFHNELLFASRLLRSSSSSTCRHVVPAIGFASDPKRRRFLIVYDLMHNGNLHDALLRRKSPELMRWQTRFSVALDVARGLQFLHSCDPPVIHGDIKPSNVLLDRSFAAKIGDFGLARFKTENRLEAEALGCESDGASVFEEQSPEGPIPSPDAVVKKNGKGVGGNLVNEENGGSSGAVLKDYVMDWIGNDVGMQRPKAELTASASAASTSAKDEINKKKKKNNSSSSRRKLEWWESMDEDGDVLKKQRRRPVREWWKEEYSQELASKKKKKNKKKKEKDRNGAERESDEWWFREIKKSGSRNSVDSWVDDGEIPKSGAMSSNQSMRGTVFYVAPECGGDASEKCDVYSFGVLLLVIVSGRRPLEVTTGSPLSSSEFQRANLVSWGRHCSRKGKLLDLVDESIQGLDKEQALLCIKVALLCLLKSPSRRPSMKEVVGMLSGELDPSQLPLHYSSSSSTQQ 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03962 566 MobiDBLite consensus disorder prediction 305 336 - -
Aip09g03962 566 Gene3D Phosphorylase Kinase; domain 1 41 151 - -
Aip09g03962 566 Gene3D Transferase(Phosphotransferase) domain 1 153 243 - -
Aip09g03962 566 Gene3D Transferase(Phosphotransferase) domain 1 408 554 - -
Aip09g03962 566 SMART serkin_6 68 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03962 566 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 1 562 - -
Aip09g03962 566 ProSiteProfiles Protein kinase domain profile. 68 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03962 566 PANTHER OS07G0586332 PROTEIN 1 562 IPR044576 -
Aip09g03962 566 SUPERFAMILY Protein kinase-like (PK-like) 52 558 IPR011009 -
Aip09g03962 566 MobiDBLite consensus disorder prediction 319 336 - -
Aip09g03962 566 Pfam Protein tyrosine and serine/threonine kinase 71 229 IPR001245 GO:0004672|GO:0006468
Aip09g03962 566 Coils Coil 364 393 - -
Aip09g03962 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03962 Aip-Chr9 146048082 146050128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03962 422 542 Receptor kinase-like Gene Family AT3G58690 31.496 4.31e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Aip09g03962 PK_Tyr_Ser-Thr 4.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03962 - - aprc:113872924 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03962 09 146048082 146050128 Aip09g03962 09 146048082 146050128 ECH
Aip05g03726 05 145283795 145287357 Aip09g03962 09 146048082 146050128 PCT