Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03961 ATGGACGAGAAAGCAGAATACAAATCACCAAGAGATCAAGATGGTCATGGAACTCACACTGCAGCAACAGTTGCAGGTTCACCGGTGCGCGGTGCTAACCTTCTCGGCTACGCTTACGGCACCGCGAGAGGGATGGCACCGTCGGCAAGAATCGCAGCGTATAAAGTTTGCTGGACCGGTGGATGCTTCAGTTCTGATATTCTCTCAGCCGTGGACAGAGCCGTGGCTGACGGAGTAAACGTTCTATCAATCTCTTTAGGTGGCGGAGTCTCCTCTTACGACCGAGATTCTTTATCCGTTGCCGCATTTGGAGCAATGGAGCACGGAGTTTTTGTTTCTTGCTCTGCCGGAAATGCAGGCCCTGACCCTAAGCAGTATCCTCTGGTGTACTTAGGAGGCAACTCATCATCCCTGGATCCAAGATCTTTGTGCTTGGAAGGAACCTTGGATCCTAAAATAGTGAAAGGGAAGATTGTGATCTGTGACAGGGGAATCAGTGCAAGAGTTCAGAAGGGGCAAGTAGTGGCATCAGCAGGAGGAGTTGGAATGATTCTAACAAACACCGCCACCAACGGCGAAGAGCTTGTTGCCGACTGCCACCTCCTTCCGGCGGTGGCAATCGGAGAGACAGAAGGAAAAGAGCTCAAACGTTACGTGTTAACAAAAAAGAACGGAAAAGCAACTGCAACTCTGGCTTTCATGAACACAAGATTGGGAATTAGGCCTTCCCCTGTGGTGGCTGCGTTTTCTTCAAGAGGGCCTAATTTCTTAACACTTGAGATTCTGAAACCTGATCTGGTGGCTCCCGGTGTCAACATTCTTGCCGCGTGGAGCGGCCTCATTGGTCCATCTAGCTTGCAGACAGATCACAGAAGGGTCAAGTTCAACATACTCTCCGGAACTTCAATGTCATGCCCTCATGTTAGTGGTGTTGCCGCATTCATCAAGTCTAAGCATCCTCAATGGAGTCCTGCAGCTATCAAATCTGCACTCATGACAACCGCTTATGTTCATGACAACACAATCAAGCCTCTCAAAGATGCATCTAGTGCTGTTCCTTCCACTCCTTATGATCATGGTGCTGGCCACATTAATCCAAGAAAGGCTCTTGACCCTGGCTTAGTCTATGACATTAGTCCACAGGATTACTTCGAATTCTTGTGCACACAGAAGCTAACTACACCACAGTTAAGAGTTTTTGGCAAATCCTCTAACAGAACTTGCAAGCACTATCTTTCAACTGCTGCTGACTTGAACTATCCAGCAATATCTGTGCTGTTTCCTGAGAAAGCTTCTGTTTCTTCTTTGACTGTTCATAGAACTGTTACCAATGTAGGACCTGCTGTTTCCAAGTACCATGTGATGGTGTCACCATTCATAGGTGCTTCTGTGAAAGTTGAGCCTGATGTGTTGAATTTCACAACCAAGTATCAAAAATTGTCTTATAAGGTTACGTTTACTACAAGGTCTAGGCCTAAGGAACCCGAATTTGGAGGTCTGGTTTGGAAGGATGGTGTGCACAGGGTGAGAAGCCCCATTGTCATAACATATATGCCTCCAATATGA 1566 0.4719 MDEKAEYKSPRDQDGHGTHTAATVAGSPVRGANLLGYAYGTARGMAPSARIAAYKVCWTGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYDRDSLSVAAFGAMEHGVFVSCSAGNAGPDPKQYPLVYLGGNSSSLDPRSLCLEGTLDPKIVKGKIVICDRGISARVQKGQVVASAGGVGMILTNTATNGEELVADCHLLPAVAIGETEGKELKRYVLTKKNGKATATLAFMNTRLGIRPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWSGLIGPSSLQTDHRRVKFNILSGTSMSCPHVSGVAAFIKSKHPQWSPAAIKSALMTTAYVHDNTIKPLKDASSAVPSTPYDHGAGHINPRKALDPGLVYDISPQDYFEFLCTQKLTTPQLRVFGKSSNRTCKHYLSTAADLNYPAISVLFPEKASVSSLTVHRTVTNVGPAVSKYHVMVSPFIGASVKVEPDVLNFTTKYQKLSYKVTFTTRSRPKEPEFGGLVWKDGVHRVRSPIVITYMPPI 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03961 521 PANTHER XYLEM SERINE PROTEINASE 1 125 516 - -
Aip09g03961 521 PANTHER XYLEM SERINE PROTEINASE 1 3 124 - -
Aip09g03961 521 MobiDBLite consensus disorder prediction 1 15 - -
Aip09g03961 521 Pfam Fibronectin type-III domain 417 515 IPR041469 -
Aip09g03961 521 ProSitePatterns Serine proteases, subtilase family, serine active site. 300 310 IPR023828 -
Aip09g03961 521 Gene3D - 126 239 - -
Aip09g03961 521 CDD PA_subtilisin_like 120 228 - -
Aip09g03961 521 SUPERFAMILY Subtilisin-like 7 371 IPR036852 GO:0004252|GO:0006508
Aip09g03961 521 Gene3D Peptidase S8/S53 domain 4 125 IPR036852 GO:0004252|GO:0006508
Aip09g03961 521 Gene3D Peptidase S8/S53 domain 240 383 IPR036852 GO:0004252|GO:0006508
Aip09g03961 521 ProSiteProfiles Serine proteases, subtilase domain profile. 1 370 - -
Aip09g03961 521 PRINTS Subtilisin serine protease family (S8) signature 12 25 IPR015500 -
Aip09g03961 521 PRINTS Subtilisin serine protease family (S8) signature 299 315 IPR015500 -
Aip09g03961 521 MobiDBLite consensus disorder prediction 1 23 - -
Aip09g03961 521 Gene3D - 387 518 - -
Aip09g03961 521 Pfam Subtilase family 5 341 IPR000209 GO:0006508|GO:0008236
Aip09g03961 521 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 124 IPR045051 -
Aip09g03961 521 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 125 516 IPR045051 -
Aip09g03961 521 Pfam PA domain 125 215 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03961 Aip-Chr9 146039319 146040979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03961 1 521 Subtilisin-like Serine Gene Family AT5G51750 68.827 0.0 799
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03961 - - gmx:102661592 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03724 05 145257552 145260168 Aip09g03961 09 146039319 146040979 ECH
Aip09g03961 09 146039319 146040979 Aip09g03961 09 146039319 146040979 ECH
Aip05g03724 05 145257552 145260168 Aip09g03961 09 146039319 146040979 PCT