Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03948 ATGCAGCTCCTCAACTCCGATGAACCCGCCTCCGAAACCCGCAGCCATCCCGAGAAACCCCAAGAAGAATCCAGTTCCCCCGCGACCGATTCATCGGACTCCACAACCGACGAAGGCGTGGCCCTCGACGTTTCCGGGAAGAGCCTGGAGTTTTCGGCGGCGGAGGAGGAGACCGCGGAGGACTCCGCTGCGGAGAGCTTGTACCTCTACAGGAACGTTTACAGCTTGGTTCCGAAGTGGGTGGGTGCTCTGGCGCGGTTGAAGACGCTGAAGTTCTTTGGGAACGAGGTGAACTTGTTCGCTCCGGAGTTCAGGGGAATGACGGCACTGGAGTGCTTGCAAATGAAGATTTCTTCGCCTGGGATCGGTGGGTTGCCGCTTCACAAGCTGAATGGGTTGAAGGAGCTCGAGCTCTCCAGAGGGCCACCAAGGCCTTCGGCTTTTCCATTGTTGGCCGAGATTGCTGCCCTTAAGCGATTGACTAAGCTTTCTATTTGTCATTTTTCTATCAGGTATCTACCTCCGGAAATTGGATGCTTAAAGAATCTGGAGTATCTTGACCTTTCATTCAATAAATTGAAGACATTGCCGTCAGAGATCAGTTGCTTGAATAGCTTAATAACCATGAAAGTTGCGAATAATAAGTTAGTGGAGCTACCGTCCACAATGACCTCTCTTACAAGGTTGGAGAGTTTGGACCTTTCAAATAATAGGTTGACTTCGTTAGGCTCTATTGAACTTGGTTCCATGTGTAGGCTTCAGCTCTTAAATCTTCAGTACAACAAGCTGCTCAGCGTTTTTCACATTCCTTCATGGATATGCTGTAAACTGGAAGGAAATGATGAAAGTGGGTGTAACGATGATTGTAGCAGTTCTTCTGTTGAAATGGATGTCTATGAAAGCAGTCAACAGGAAAATGATCGAACAATTTCTAATGGTGCTCATAATACCTCATCAAGCACATTAACTAGTACCTCATCTAGCAGTAGATGTTTCTCAGCCCGGAAGTCAGGTAAAAGGTGGAAGCGGCGGTTTTATTTACAGCAAAAAGCTCGTCAAGAGCGCCTGAATAACAGCAGGAAGTGGAAAGTTGTAGATCAAGATCAGTTATTGAGCAATAATATTCAAATAATTTCTGAGTCTGGAAACATTGCTGCTGCAAGCTGCAAAGAAACTGTATCAGACCATGTGAATCTGGATGATAATGGGAAAAGAATATTCTCTGAAAAAGAAGTAAATGATAATTTAAGTGGTAGTAATAAGGATGAAGTAATATTAGAAAAGCAATTTTCTAGTGACAATTGCCATACTGCTGAATGTAAAGATGAAAGAGATGCATCCTTAAATGGACCTGGTGAACAGGATGAACAATCTTTGGAGATTTTGAAGTGTTCTTCTACAAAGAGGTATTCAGATCGGCATCTTGACAATCCTAAACCATGCAAGTTTAGAAAACCAATTGTTGATGCCTCAATATTGGCGTGCAAGTACAGTAAGTTCTCAATTTGTGGCTTTGAAGACCATCTGTCGGATGGGTTTTATGATGCAGGACGTGATCGGCCATTTATGCCTCTTGAGAGTTATGAGCAGAATCAGTGCCTTGATTCTCGTGAGGTCATCCTACTAGACAGAAAAAGGGACGAAGAGTTGGATGCTATATTGCTCTCTGCTCAGGCACTGGTCACAAATTTGAAAAAGTTAAATGGTTTAAATACACGTGGGATGCATGCCGTAGTTGATAGCTTGCAGACAGCTTCACTGCTTGCACTCTTTGTATCGGACCATTTTGGTGGCAGCGATAGAGGTGCTATGGTAGAAAGAACACGGAAATCTGTGTCAGGTTCAAACTATAATAAGCCTTTTGTTTGTACGTGCTCAGCTGGAAGCAGCACCAGTATGACTTCTTCTAAAAAACCTGCTGTAAACACCATAGAAGATATCACTCTTTCTAGAATCTCTGAACAATGTATCGATTCTATTAAAAAAAGACGAAGTTCAATCATAGTCCCTATTGGTTCTGTGCAGTATGGTGTATGTAGACATAGAGCTCTGCTTTTGAAGTATTTATGCGATCATATGGTGCCAGCAGTGCCTTGTGAGCTTGTCAGGGGGTACTTGGACTTTTCCCCACATGCATGGAATATCATTCTGATTAAGAGGGGTGATACATGGGTCCGAATGCTGGTTGATGCTTGTCGACCCCATGACATAAGAGAAGAGAAGGATCCTGAATACTTCTGCAGGTATGTACCTCTTAGTCGAGCCACGATCCCCCTTTCTTCTCGTGGAAGTCATGGTCCTGATTGTTTGTTTCCATCTCTCTCTACTTGTGATGAACTTAAGAAAAAAGCTTCCACTACTTTAGTTCCGTGCAAAATTGGGTCAGTTGAGGCTGCAGCAAAGGTACGTACTTTGGACGTGCAGGGAAGTTCAGCAGCCGAAATTAGAAATTTTGATTATAATTGTTTGGGAGAAGTTAGAATTCTAGGTTCTTTAAAACATCCCTGCATAGTGGAAATGTATGGACACGAAATATCGTGCCAATGGACTTCCACAGCTGATGGCAAGCCTCACAATCGCATATTAAGATCTGCAATTTTTATGGAGTATGTTGATGGCGGCTCCTTGAAAAATTATTTGGAAAAGCTATCAGAAGCTGGTGAAAAGCATGTCCCTATGGAGTTGGCGTTGTATATCGCCAGAGATGTCTCCTGTGCCTTGTCAGAGCTGCACTCAAAGCACATAATTCATCGGGACATTAAAAGTGAAAACATCCTGTTTGATTTGGATAGAAAGACTGATGATGGAACTCCCACTGTGAAGTTGTGTGATTTTGACAGTGCAGTGCCACTAAGATCACGTATGCATGCTTGCTGTATTGCACATATGGGAACTCCACCTCCTTGTGTATGTGTTGGAACACCACGGTGGATGGCTCCAGAAGTTATGCGGACTATGTATGAAGAACGCGCTTATGGATTGGAAGCTGATATTTGGTCATTTGGATGTTTACTTTTGGAGATACTGACTCTGCAAATTCCATATTATGGAGTGCCTGATTCAGACATCCATGACAGTCTGCAGATGGGTAAGCGGCCACGATTAATAGATGAACTGGAGGCATTGAGTTCAATGAGTGAACCCTCAGTAATTCAATCTGGTGAAGACCTGGAAAAATCAGATGCAGAGGCAGACTTGCTGAAATTCCTTGTTGGGTTGTTTCATAGATGCATGGAAGAAAATCCTGCAGAGCGTCCTACAGCTAAAGAAATCCATGAAATGCTACTTGCACGCACAGGCCGTTTACAAGCACAAGATGATAGGAAGATTTAG 3333 0.4353 MQLLNSDEPASETRSHPEKPQEESSSPATDSSDSTTDEGVALDVSGKSLEFSAAEEETAEDSAAESLYLYRNVYSLVPKWVGALARLKTLKFFGNEVNLFAPEFRGMTALECLQMKISSPGIGGLPLHKLNGLKELELSRGPPRPSAFPLLAEIAALKRLTKLSICHFSIRYLPPEIGCLKNLEYLDLSFNKLKTLPSEISCLNSLITMKVANNKLVELPSTMTSLTRLESLDLSNNRLTSLGSIELGSMCRLQLLNLQYNKLLSVFHIPSWICCKLEGNDESGCNDDCSSSSVEMDVYESSQQENDRTISNGAHNTSSSTLTSTSSSSRCFSARKSGKRWKRRFYLQQKARQERLNNSRKWKVVDQDQLLSNNIQIISESGNIAAASCKETVSDHVNLDDNGKRIFSEKEVNDNLSGSNKDEVILEKQFSSDNCHTAECKDERDASLNGPGEQDEQSLEILKCSSTKRYSDRHLDNPKPCKFRKPIVDASILACKYSKFSICGFEDHLSDGFYDAGRDRPFMPLESYEQNQCLDSREVILLDRKRDEELDAILLSAQALVTNLKKLNGLNTRGMHAVVDSLQTASLLALFVSDHFGGSDRGAMVERTRKSVSGSNYNKPFVCTCSAGSSTSMTSSKKPAVNTIEDITLSRISEQCIDSIKKRRSSIIVPIGSVQYGVCRHRALLLKYLCDHMVPAVPCELVRGYLDFSPHAWNIILIKRGDTWVRMLVDACRPHDIREEKDPEYFCRYVPLSRATIPLSSRGSHGPDCLFPSLSTCDELKKKASTTLVPCKIGSVEAAAKVRTLDVQGSSAAEIRNFDYNCLGEVRILGSLKHPCIVEMYGHEISCQWTSTADGKPHNRILRSAIFMEYVDGGSLKNYLEKLSEAGEKHVPMELALYIARDVSCALSELHSKHIIHRDIKSENILFDLDRKTDDGTPTVKLCDFDSAVPLRSRMHACCIAHMGTPPPCVCVGTPRWMAPEVMRTMYEERAYGLEADIWSFGCLLLEILTLQIPYYGVPDSDIHDSLQMGKRPRLIDELEALSSMSEPSVIQSGEDLEKSDAEADLLKFLVGLFHRCMEENPAERPTAKEIHEMLLARTGRLQAQDDRKI 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03948 1110 ProSiteProfiles Leucine-rich repeat profile. 182 203 IPR001611 GO:0005515
Aip09g03948 1110 Gene3D Ribonuclease Inhibitor 36 307 IPR032675 -
Aip09g03948 1110 Pfam Ethylene-responsive protein kinase Le-CTR1 648 730 - -
Aip09g03948 1110 ProSiteProfiles Leucine-rich repeat profile. 228 249 IPR001611 GO:0005515
Aip09g03948 1110 MobiDBLite consensus disorder prediction 296 334 - -
Aip09g03948 1110 SUPERFAMILY Protein kinase-like (PK-like) 818 1095 IPR011009 -
Aip09g03948 1110 SMART serkin_6 778 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03948 1110 PRINTS Leucine-rich repeat signature 183 196 - -
Aip09g03948 1110 PRINTS Leucine-rich repeat signature 226 239 - -
Aip09g03948 1110 ProSitePatterns Serine/Threonine protein kinases active-site signature. 915 927 IPR008271 GO:0004672|GO:0006468
Aip09g03948 1110 SMART LRR_sd22_2 226 247 - -
Aip09g03948 1110 SMART LRR_sd22_2 180 202 - -
Aip09g03948 1110 SMART LRR_typ_2 180 203 IPR003591 -
Aip09g03948 1110 SMART LRR_typ_2 226 249 IPR003591 -
Aip09g03948 1110 SMART LRR_typ_2 250 276 IPR003591 -
Aip09g03948 1110 Pfam Protein kinase domain 819 1093 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03948 1110 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 65 1099 - -
Aip09g03948 1110 Pfam Leucine rich repeat 159 216 IPR001611 GO:0005515
Aip09g03948 1110 MobiDBLite consensus disorder prediction 1 41 - -
Aip09g03948 1110 MobiDBLite consensus disorder prediction 296 335 - -
Aip09g03948 1110 MobiDBLite consensus disorder prediction 24 41 - -
Aip09g03948 1110 PANTHER BNAC08G43810D PROTEIN 65 1099 - -
Aip09g03948 1110 SMART LRR_bac_2 203 222 - -
Aip09g03948 1110 SMART LRR_bac_2 180 199 - -
Aip09g03948 1110 SMART LRR_bac_2 226 245 - -
Aip09g03948 1110 ProSiteProfiles Protein kinase domain profile. 754 1095 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03948 1110 Gene3D Transferase(Phosphotransferase) domain 1 791 1108 - -
Aip09g03948 1110 SUPERFAMILY L domain-like 66 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03948 Aip-Chr9 145913719 145921224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03948 825 1098 MAP Kinase Kinase Kinase AT1G63700 29.603 3.81e-23 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Aip09g03948 Pkinase 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03948 - - gmx:100811118 1635.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03948 09 145913719 145921224 Aip09g03948 09 145913719 145921224 ECH