Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03945 ATGGAGGCGAAGAAAGCAATGCCTCCTGATAAGTTCGCTAAGCTATGGACTATTGATCCGAAACGCGCCAAAAGAATACTTGCTAATCGGCAATCTGCTGCACGTTCAAAAGAGAGAAAGGCCCGCTATATACAAGAACTCGAGCGCAAAGTTCAGACCCTTCAGACCGAAGCTACAACTCTTTCTGCCCAATTGACCCTATACCAGGTTCGTGCTGTCCATCTGAAACCACTTGCATGA 240 0.4708 MEAKKAMPPDKFAKLWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQVRAVHLKPLA 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03945 79 SUPERFAMILY Leucine zipper domain 21 76 IPR046347 GO:0003700|GO:0006355
Aip09g03945 79 PANTHER ATBZIP TRANSCRIPTION FACTOR 1 70 - -
Aip09g03945 79 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 19 79 IPR004827 GO:0003700|GO:0006355
Aip09g03945 79 Gene3D - 20 71 - -
Aip09g03945 79 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 70 - -
Aip09g03945 79 SMART brlzneu 17 79 IPR004827 GO:0003700|GO:0006355
Aip09g03945 79 Pfam bZIP transcription factor 21 68 IPR004827 GO:0003700|GO:0006355
Aip09g03945 79 Coils Coil 37 64 - -
Aip09g03945 79 CDD bZIP_plant_RF2 22 69 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03945 Aip-Chr9 145893611 145894725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03945 1 70 bZIP Transcription Factor Family AT1G06850 90.000 1.49e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip09g03945 bZIP_1 2.8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03945 - - adu:107466864 142.51