Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03944 ATGGAGCAACACTGTTGTTACTGCTTCGACTGCCTCCAGCTTCGAATCAACTCCGATTTCTCCGACCAACTCTTGTTCAATTATGGCATTTCCTCTTCCCCTTTCCCTTTCGGTTCTTCCGCCGTCGTCCAAATTTCTGGTACAGCTGGCAGTGAAGCTTCATCCGGTCAATTTATATTGCAGTACACGCGCTCTCATCACAGCAATTGTTTCTCCAATTATGTAAATGAGTATATTTTGGATAGTAATGAAGGAACTAGGAGTAGTGATCCTGATACTGGCACAAGCCAATGTGGTCCTAATGTGCAAAATGGTGGAATTTCTTCATCATCAGATGCTGAAACCAAAAGAGCATCTTCCATGAGCACAAGTTGTAGTCATTCCGGAAAGTTTTCTTGCTTCAGGATAATCACTTCACTGGCCCCCGGTGCCCGCGTGGAAGTTTCTTCATTTTCTACCATCCAAGAGGTTGCCACTGATTTCTTGTCTGGGTTAATGGAAGATCATGTGTTGGATTCACTTGATATCTGGATTGAAGGGAAAGCTTCAGGAAGGGACAGCACAAATTTCCTTAGCTTAATTGGCTTGCCATTTTTTCAGGAGGACACATTTCCCGGCTCCTTGAGGCATCCAAACATAGCCCCTGTCCTTGCATTTTTTAAATCATCTGATCATGTTAACATGGTGCTTCCAAAGACTCCATACAATCTCGAGAATATTCTGCATTTTAACCCCAGTGCCTTTAAATCTGACTGGCATAGAGGATTTCTTATATATCAGCTGCTCTCAGCTTTGGTATACCTTCATGGTCTAGGGGTTTCTCATGGCAACTTATGCCCATCCAATATCATGTTGACTGACTCATTATGGTCTTGGCTGAGATTATGGAATGAACCTACATTGGAATTTAATTCAACTTTACAAAAGAGTGAAGACGTTAATTCAAGCCCTGCAAAAATTAGTTGTTACAATAGTGGTTGCCATTCTAATGGTCTTTATGCTGATTTAAAGCTTTCACCGTCAATAGATTGGCATTCTAGCTTCCATCATTGGTGGAAAGGAGAGTTGAGTAATTTTGAGTATTTACTTATCTTAAACAGATTAGCAGGCAGAAGGTGGGGAGACCATACATTTCATCCAGTAATGCCTTGGGTAATTGATTTTAGCACCAAACCTGATGATAATTGTGATGCAGGATGGCGAGACTTGAGCAAGAGCAAATGGCGCTTAGCAAAAGGTGATGAACAGTTGGATTTCACCTATTCAACATCTGAAATACCTCATCATGTGTCAGATGAATGCCTCTCTGAACTGGCTGTGTGCAGTTATAAAGCAAGAAGGCTGCCTTTGAGGGTACTCCGAATGGCTGTTCGTTCAGTTTATGAACCTAACGAATATCCTTCCACAATGCAGAGGCTCTATCAATGGACCCCAGATGAGTGCATTCCAGAGTTCTACTGTGACGCCCAAATATTTAGGTCGATTCATGATGGAATGGCTGATTTGGCTGTACCTTCTTGGGCTGAGACTCCAGAGGATTTCATTAAATTGCATCGTTGGGCATTAGAAAGTAATATGGTTTCTTTTCAACTCCATCAATGGATAGATATAACCTTTGGGTACAAAATGTCTGGGCAAGCAGCTATTGCTGCAAAGAATGTTATGCTTCCTATATCAGAACCTACGATGCCAAGGTCAACGGGACGTCGTCAGCTCTTTACACGACCTCACCCCATTCGTCTTGCCACTCCAACTGCACGTCGTTATGCCACCAATAAATATGCTAAAGTTTGGAGCCAGGAAAATGAAATACTGCGAGAGACGACTCTCCTGTCTGATGCTGCCTATCTACAAGAACTAGAACAAGCATCTGCATTTTCTGAGCATGCTAGGCATTTGAATTCTTGTTATCAGTGTCCATTAAATCAAACACAGGGAGATCCAACAAAGCAGTCAATTAACGAAAGCATATGCAAATTATCTTTGCCTGACAGAAATTACATGCTGCCATATAAAATGAATCTGATTTCTTTGATTCAGCATATGAAGGAAGAAGATGACGGTTCGCCAGGATATCCAGACTATTTGCTTTGGAGGCAAAAATTGTCTTCCTCAAAAGTTAGCTCTGAAGATATTGCTAGGGACATTTTTTCTATTGGTTGTCTGTTAGCAGAACTTCATCTTTCTAGTCCCCTCTTTGATTCAACCTCATATGCGATGTACTTGGAAGATGGGACCTTACCAGGATCTCTTTGTGAACTACCTCCTTATGTTAGGTTACTTGTTGAAGCATGCATACAAAAGGATTGGACGAGGAGGCCTTCAGCCAAATTTCTTCTGGAATCACCTTATTTTCCAAAGACAATAAAGTCCTCCTACACGTTTCTTGCCCCACTTCAGCTTGTTGCTAAGGATGAGACCCGCCTTCGTTATGCCACAAATCTTGCAAAGAAGGGAGCTCTCAGAGAAATGGGCTCATTAGCAGCTGAAATGTGCGCTACTTATTGCTTACCACTTGTAGTCAATACTGTGAATGATGCTGAAGCTGAATGGGCATATATACTACTGAAAGAATTTATGAAATGCTTAAAAGAAAAAGCAGTGAAGAAATTAATCTTGCCAACCATACAGAAGATTTTGCAGGCTAGTCATCTACATTTAAAGGTTTCCCTTTTACAAGATTCATTTGTACGTGAAATATGGAACCGAGTTGGTAAACAAGTATACCTGGAAACTATTCACCCATTGGTTTTATCAAACTTGTATAATTCTCTGGATAAAAGTTCAGCTGCATCTGCCTCTGTCCTTCTAGTTGGTTCTAGTGAGGAGCTTGGAGTACCTATTACCATCCACCAGACAATCTTGCCTCTTGTTTACTGTTTTGGTAAAGGACTTTGTGCTGATGGCATTGATGTGCTGGTCAGACTTGGTGGCCTTTTTGGAGAATCCTTTATTGTAAAACAGATGCTACCATTACTAAAAAATGTTGTTCGCTCGTTCATTGATATGTCAAGCATGAACAAGCCTGATCCTGTCCAGAGTTGGAGTGCTTTAGCACTTATTGATTGCATGATGACATTAGATGGCCTTTTACCTTTCTTGACAGAAGAGATTATTGTAAAGGAGCTGCTTGAAGACCAAAATTGTGTACTCATCAGGGTTCTTATGCAGAAACATATGGACATTGCCGTGCTTCAGGTTGCTGCTACTACTCTCTTTGCAATATGTCAGCGAATTGGGGCAGATTTGACAGTATTGCATATTCTACCAAAGCTTAAAGAACTATTTGATGAGCTTGCTTTCCAGCAAATTTCTAAAGATTCAACTACTGTTACCAGAAATTTGAAGGTTGCCAAACTAAAAATTGTTGGGGACTTGCAAATTGAAAGCCGAATGGATCTAGTGTTGGTTCTCTATCCTTCGTTTGCCTCTCTTCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACATGGTTACAACTTGAACAATTTCTTCTACGGCAGCATAATTGGAAGTGGGAATGTGCAGGGGAATCATCAAAAGGTAGTTCAGAAAATTTTATTGGTAGAAGATCCACATTTGGCCAGGGTTCCACCTCTGAATACACTCCGGCAAAGCTGTTGCTTAATGGCGTTGGATGGTCAATTCCACAATCCCAAGGAAGTAAAAGTGCTAAGAACTTGATTCCTCAGAGACAATATTTTAAACGCAGTCAGAGTCAAGTAGCAACGCAAGAAGACACACCATACCAATTTAACCAAGAACCCTGGTTTTGGTTCCCCAGCCCCGCCACCGTATGGGATGGACCTGAATTTCTCGGGCGGGTGGGGGTTCAAAAAGATGACCTTCCATGGAAGATCAGAGCATCTGTGATATACTCTATACGTGCAAATCATGGAGCAGTGAGGTCTCTAGCTGTTGATCAAGATGAAAGTACTGTTTTCACTGCAGGAATTGGTCAAGGGTATAAAGGAACTATTCAGAAGTGGGAACTAAGCCGAACTAACTGTCTTTCTGGCTATTATGGACATGAGGAGGTTGTGAACAATATTTGCATCTTATCATCTAGTGGAAGAGTGGCGTCTTGTGATGGAACAGTTCATATTTGGAATAGTCAAACAGGGAAGCAAATATCAGTATTTGAAGAGTCCCAAACAGATCCTGCCCATACTGCAAGTGATCTATCCGCTGCATCAAAAATTAACATTGACCAGGCAAACATGCTCAATTTGAATACACTGTCAAATGGAATATTGTCTAGTACATTTGATTCAAGCCTTTATACTTGCATGCATCTATTAGACGCGGCTGAAACACTTGCCGTTGGCACTGGAAATGGTTCACTCAGGTTTATTGATGTTGCTCGAGGCCAAAAGCTTCATATGTGGAGAGGAGAATCTAATGAATCTAGTTTCCCTTCTCTTATTTCTTCCATTTGTTCCTCTGGATCTGACAAGATGCATGCAGGTGGAATTTCCACTTTGCCATCTTTTATTGCAGCTGGACTAAGTTCTGGTCATTGTAAATTATTTGATGCAAAGAGTGGAAATGTCATTTCCTCTTGGCGAGCTCATGATGGATATGTAACAAAATTGGCAGCACCCGAGGATCACATGCTCATATCCAGCTCTCTTGACAGAACTTTAAGAGTCTGGGATTTAAGAATGAATTTGCCATCGCAGCCCATTATTTTCAGAGGTCCTTCAGATGGCATATCCAGTTTCGCCATATGGGGCCAAGATGTTATTTCGATTTCCCGGAATAGGATTGGCCTTCTCTCCTTGCCTAAATCTGCCAATGAAATAGATGGACAGCATCATATCATTCCCCAGAAGCTCTATGTTTCAGATAACAATGGAATGAGGAGCTTGTCAGCATTATCAAATGTCGGAAAAGTCGGAGCCGCCCACTGCCTAAAAAGAATAATATTTTAA 4935 0.4136 MEQHCCYCFDCLQLRINSDFSDQLLFNYGISSSPFPFGSSAVVQISGTAGSEASSGQFILQYTRSHHSNCFSNYVNEYILDSNEGTRSSDPDTGTSQCGPNVQNGGISSSSDAETKRASSMSTSCSHSGKFSCFRIITSLAPGARVEVSSFSTIQEVATDFLSGLMEDHVLDSLDIWIEGKASGRDSTNFLSLIGLPFFQEDTFPGSLRHPNIAPVLAFFKSSDHVNMVLPKTPYNLENILHFNPSAFKSDWHRGFLIYQLLSALVYLHGLGVSHGNLCPSNIMLTDSLWSWLRLWNEPTLEFNSTLQKSEDVNSSPAKISCYNSGCHSNGLYADLKLSPSIDWHSSFHHWWKGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSTKPDDNCDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLRVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDAQIFRSIHDGMADLAVPSWAETPEDFIKLHRWALESNMVSFQLHQWIDITFGYKMSGQAAIAAKNVMLPISEPTMPRSTGRRQLFTRPHPIRLATPTARRYATNKYAKVWSQENEILRETTLLSDAAYLQELEQASAFSEHARHLNSCYQCPLNQTQGDPTKQSINESICKLSLPDRNYMLPYKMNLISLIQHMKEEDDGSPGYPDYLLWRQKLSSSKVSSEDIARDIFSIGCLLAELHLSSPLFDSTSYAMYLEDGTLPGSLCELPPYVRLLVEACIQKDWTRRPSAKFLLESPYFPKTIKSSYTFLAPLQLVAKDETRLRYATNLAKKGALREMGSLAAEMCATYCLPLVVNTVNDAEAEWAYILLKEFMKCLKEKAVKKLILPTIQKILQASHLHLKVSLLQDSFVREIWNRVGKQVYLETIHPLVLSNLYNSLDKSSAASASVLLVGSSEELGVPITIHQTILPLVYCFGKGLCADGIDVLVRLGGLFGESFIVKQMLPLLKNVVRSFIDMSSMNKPDPVQSWSALALIDCMMTLDGLLPFLTEEIIVKELLEDQNCVLIRVLMQKHMDIAVLQVAATTLFAICQRIGADLTVLHILPKLKELFDELAFQQISKDSTTVTRNLKVAKLKIVGDLQIESRMDLVLVLYPSFASLLGIEKLRQCCATWLQLEQFLLRQHNWKWECAGESSKGSSENFIGRRSTFGQGSTSEYTPAKLLLNGVGWSIPQSQGSKSAKNLIPQRQYFKRSQSQVATQEDTPYQFNQEPWFWFPSPATVWDGPEFLGRVGVQKDDLPWKIRASVIYSIRANHGAVRSLAVDQDESTVFTAGIGQGYKGTIQKWELSRTNCLSGYYGHEEVVNNICILSSSGRVASCDGTVHIWNSQTGKQISVFEESQTDPAHTASDLSAASKINIDQANMLNLNTLSNGILSSTFDSSLYTCMHLLDAAETLAVGTGNGSLRFIDVARGQKLHMWRGESNESSFPSLISSICSSGSDKMHAGGISTLPSFIAAGLSSGHCKLFDAKSGNVISSWRAHDGYVTKLAAPEDHMLISSSLDRTLRVWDLRMNLPSQPIIFRGPSDGISSFAIWGQDVISISRNRIGLLSLPKSANEIDGQHHIIPQKLYVSDNNGMRSLSALSNVGKVGAAHCLKRIIF 1644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03944 1644 SUPERFAMILY BEACH domain 338 580 IPR036372 -
Aip09g03944 1644 CDD Beach 351 580 IPR000409 -
Aip09g03944 1644 SMART Beach_2 348 580 IPR000409 -
Aip09g03944 1644 Gene3D Transferase(Phosphotransferase) domain 1 682 794 - -
Aip09g03944 1644 SMART WD40_4 1515 1553 IPR001680 GO:0005515
Aip09g03944 1644 SMART WD40_4 1334 1371 IPR001680 GO:0005515
Aip09g03944 1644 SMART WD40_4 1416 1453 IPR001680 GO:0005515
Aip09g03944 1644 SMART WD40_4 1288 1331 IPR001680 GO:0005515
Aip09g03944 1644 ProSitePatterns Trp-Asp (WD) repeats signature. 1540 1554 IPR019775 -
Aip09g03944 1644 SUPERFAMILY WD40 repeat-like 1291 1589 IPR036322 GO:0005515
Aip09g03944 1644 PANTHER GH12955P 7 1630 - -
Aip09g03944 1644 Pfam Beige/BEACH domain 350 560 IPR000409 -
Aip09g03944 1644 Gene3D Transferase(Phosphotransferase) domain 1 197 292 - -
Aip09g03944 1644 ProSiteProfiles Protein kinase domain profile. 134 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03944 1644 ProSiteProfiles BEACH domain profile. 336 606 IPR000409 -
Aip09g03944 1644 CDD PKc 207 288 - -
Aip09g03944 1644 Gene3D - 1285 1399 IPR015943 GO:0005515
Aip09g03944 1644 SUPERFAMILY Protein kinase-like (PK-like) 200 290 IPR011009 -
Aip09g03944 1644 Gene3D BEACH domain 341 580 IPR036372 -
Aip09g03944 1644 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1522 1555 - -
Aip09g03944 1644 SUPERFAMILY Protein kinase-like (PK-like) 711 802 IPR011009 -
Aip09g03944 1644 ProSiteProfiles Trp-Asp (WD) repeats profile. 1522 1555 IPR001680 GO:0005515
Aip09g03944 1644 Pfam Protein kinase domain 201 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03944 1644 Pfam WD domain, G-beta repeat 1517 1553 IPR001680 GO:0005515
Aip09g03944 1644 Pfam WD domain, G-beta repeat 1336 1371 IPR001680 GO:0005515
Aip09g03944 1644 Gene3D - 1400 1591 IPR015943 GO:0005515
Aip09g03944 1644 MobiDBLite consensus disorder prediction 82 128 - -
Aip09g03944 1644 SUPERFAMILY ARM repeat 742 1125 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03944 Aip-Chr9 145878791 145886648 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Aip09g03944 Beach 1.4e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03944 K17601 - gmx:100809116 2640.91