Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03935 ATGAACGGCGCAGGGCCCACAGCCACAGCCACAGCCACCGCCACTGCCACCGCCACCTTCAGGTCTATCCTCGACAAGCCCCTTCACCAGCTCACCGAAGATGACATTTCCCAACTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGCAGGCCTTCGTGGAACAAATCGCAGGCAATTCAGCAGGTCATTTCCCTGAAGGCGCTGCTCGAGCCCTCCAACGACGACGCCCCCGCCGTCGTTCCCACCCTCCATTCTACCTCGCCACCTCGGCCTCCGCCTCAGCCTCAAGGGGATTTGAACGATGCTCCGCCCGCTGAAGATCCGGCTCTTCATGCTGCCGATGACATTCAGAAATCTGCGTCGTCTCCCGAAAAACCCACTGAAACCAATGACACCAACGTTGTCAGTCCCAGAGCATGTGCAACTAGCGGAGTCGGGCAAATGACGATATTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCTGATAAGGCACAGGCTATCATGCAACTTGCAGCAAGTCCAGTCCAATTTGCTCAGGATGATCCTGTAAACAGAAATACAACAGTCTGGGTTTCTCCTTGTCACATACCATTGGATAAGGATGTCCCAGTTCCTGTTGATACAACAATGGTGCAGGTTGCTCAAGCAGATAAGATGATGGAATATCCTCTGCATTACAGGGAGAAGGGAAGCATAGCTCGTGATGCTGATCTAGATGGTCAGGCAAGCAGACAAGTTTCATTGCAACGATATCGTGAAAAGCGAAAAGACAGGGGAAGATTGAAGGGCAAGAAATTGCCCGGGGTAACGTCATCTAACTTGGAGATGTATTTGAACCTTCCAGTGAAAATCCAGACCTCAAATGGCAATTCAAGCCGAAGTAGCACATGCTCCCCACCACAGCCTAGACCGCCTCTTGCTTTCAGTGGCTCGGCTGACAACCCGCTAAAAGTTGGCCTTCCCATTGATCTCAATGACAAAGATGTTCAAGAATGCTAA 1023 0.5132 MNGAGPTATATATATATATFRSILDKPLHQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPSNDDAPAVVPTLHSTSPPRPPPQPQGDLNDAPPAEDPALHAADDIQKSASSPEKPTETNDTNVVSPRACATSGVGQMTIFYCGKVNVYDGVSPDKAQAIMQLAASPVQFAQDDPVNRNTTVWVSPCHIPLDKDVPVPVDTTMVQVAQADKMMEYPLHYREKGSIARDADLDGQASRQVSLQRYREKRKDRGRLKGKKLPGVTSSNLEMYLNLPVKIQTSNGNSSRSSTCSPPQPRPPLAFSGSADNPLKVGLPIDLNDKDVQEC 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03935 340 MobiDBLite consensus disorder prediction 78 142 - -
Aip09g03935 340 MobiDBLite consensus disorder prediction 293 340 - -
Aip09g03935 340 MobiDBLite consensus disorder prediction 243 276 - -
Aip09g03935 340 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 17 314 - -
Aip09g03935 340 Pfam Jas motif 249 266 IPR018467 -
Aip09g03935 340 MobiDBLite consensus disorder prediction 125 142 - -
Aip09g03935 340 MobiDBLite consensus disorder prediction 89 104 - -
Aip09g03935 340 Pfam tify domain 151 180 IPR010399 -
Aip09g03935 340 SMART tify_2 146 181 IPR010399 -
Aip09g03935 340 ProSiteProfiles Tify domain profile. 146 181 IPR010399 -
Aip09g03935 340 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 314 IPR040390 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03935 15 309 Tify Gene Family AT4G14720 45.397 1.59e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aip09g03935 tify 1.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03935 - - adu:107467071 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03935 09 145826334 145831084 Aip09g03935 09 145826334 145831084 ECH