Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03928 ATGGGGAAGGCAGGGAAATGGCTTAGAAACTTCTTGACAGGGAAGAAAGAAAGGGAAAAGGAGAAGGTGAAGGACAAATGTGGTGGTAATGCAACAAGTCTGAATTCTTCAAATGGAACAGAAAATCCAACCACTCCAAATTCCACAACCCCAAAGGAGAAAAGGAGATGGAGCTTTAGAAGATCATCTGCCACATCCACATCCACACCAACAACACCTTCCAAGGAATTGAACTTTGCAGAATCAAATGTCACTGCTTCACAGACACCACAAGCTGCTGCCACCACAGATATTCCTCTGGATGACGAGCAGAAGAAGCATGCCATGGCTGTGGCTGCTGCCACGGAGGCAGCAGCTGACGCGGCAGTGGCTGCAGCTCAGGCTGCGGCTGCTGTGATCCGCTTGGCTTCTGGTTCCAATGGAACAGCTGAAGAGGCTGCAGCCATCAAAATTCAATCTGTCTTTAGGTCCTACTTGGCAAGAAAAGCATTGTGTGCTCTCAGAGGACTAGTGAAGTTGCAGGCTCTGGTAAGGGGTCACTTGGTGAGAAAACAGGCCAAGGCAACACTGAGATGCATGCAGGCTTTGGTGACAGCACAGGCTAGAGCTCGTGCTCAGAGGATCCGAATTGCATCATCAGAAGGGAAGTCTTATCAGAAGCAATCAAGTTTCAGAAACACTACAGAGGAAGATTTATATGCTCAAGTGTATAATGAAATGGAGAGAGGCATGGAAGAGAACATCAAGATTGTGGAGATGGATGTCTGTGAATCAAAAGGAAACTCTAGAAGCAGAAGCAGCAGTGTGCATAAATTTCCAGCATATTATTCAAAAGAAGAAAACTTGAAGGTATCACCAGCTCCATCAGCCTTAACAGAGTTTAGTCCAAGAGCATGTAGTGGACACTTTGAGGACTGCTTCAGCACAGCACAGAGCAGCCCTCAATGCTACTCGGCCGCGTCTGGAGTTGACGATTCGAAGCATCCCTTCTCCTTCCCTAGGCCAGGCTATGCTGAGGTGATGTCCTATGACTACCCTTTGTTTCCAAATTACATGGCCAACACGGAATCATCAAGGGCCAAAGTGAGATCACATAGTGCACCAAAGCAAAGGCCTGATTCATTCGAGAGGCAGCTGAGCCGGCGAAGAGCTTCTGTGGAAGGAAGGAATGTGCCAAGGCCTGTGAGGATGCAGAGGTCATCTTCACATGTTGGTGCCACTAATCCATGGTCAGCAATCAAGCTTGATAGGTCCTCAGTTTCACTCAAGGACAACCCTGTAGCTAAGTTTGATCCTCCCCTTAATCTCACCTACTCTACCGTCTTTGGCTTAGCTCAATTTGAAGACCTGGTTTCATACACTGTGATTCTGAAAGAAACTGAATTATAA 1389 0.4723 MGKAGKWLRNFLTGKKEREKEKVKDKCGGNATSLNSSNGTENPTTPNSTTPKEKRRWSFRRSSATSTSTPTTPSKELNFAESNVTASQTPQAAATTDIPLDDEQKKHAMAVAAATEAAADAAVAAAQAAAAVIRLASGSNGTAEEAAAIKIQSVFRSYLARKALCALRGLVKLQALVRGHLVRKQAKATLRCMQALVTAQARARAQRIRIASSEGKSYQKQSSFRNTTEEDLYAQVYNEMERGMEENIKIVEMDVCESKGNSRSRSSSVHKFPAYYSKEENLKVSPAPSALTEFSPRACSGHFEDCFSTAQSSPQCYSAASGVDDSKHPFSFPRPGYAEVMSYDYPLFPNYMANTESSRAKVRSHSAPKQRPDSFERQLSRRRASVEGRNVPRPVRMQRSSSHVGATNPWSAIKLDRSSVSLKDNPVAKFDPPLNLTYSTVFGLAQFEDLVSYTVILKETEL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03928 462 MobiDBLite consensus disorder prediction 61 95 - -
Aip09g03928 462 SMART iq_5 166 187 IPR000048 GO:0005515
Aip09g03928 462 SMART iq_5 143 165 IPR000048 GO:0005515
Aip09g03928 462 MobiDBLite consensus disorder prediction 10 27 - -
Aip09g03928 462 Gene3D - 143 195 - -
Aip09g03928 462 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 430 - -
Aip09g03928 462 Pfam IQ calmodulin-binding motif 146 164 IPR000048 GO:0005515
Aip09g03928 462 Pfam IQ calmodulin-binding motif 171 187 IPR000048 GO:0005515
Aip09g03928 462 ProSiteProfiles IQ motif profile. 144 172 IPR000048 GO:0005515
Aip09g03928 462 MobiDBLite consensus disorder prediction 29 52 - -
Aip09g03928 462 ProSiteProfiles IQ motif profile. 168 195 IPR000048 GO:0005515
Aip09g03928 462 MobiDBLite consensus disorder prediction 359 389 - -
Aip09g03928 462 MobiDBLite consensus disorder prediction 362 389 - -
Aip09g03928 462 PANTHER IQ-DOMAIN 5-RELATED 1 430 - -
Aip09g03928 462 Pfam Protein of unknown function (DUF4005) 313 388 IPR025064 -
Aip09g03928 462 MobiDBLite consensus disorder prediction 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03928 Aip-Chr9 145767083 145769204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03928 1 424 IQD Protein Family AT4G14750 44.812 4.18e-96 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03928 - - gmx:100817667 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03928 09 145767083 145769204 Aip09g03928 09 145767083 145769204 ECH