Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03919 ATGTTCTCTTCCACATATGATTCAAACCCTTTCCCTAACTTCCCTTCATCTTCTTCTTCTTCATCTTATCCTAATAATAATAATAATAATAATACACTCCCTTTCTACATTGATCCACATAACAACAATGATTTTGCAACCACGCTTCTTCACCATCATGATCCATCATCACTACTTGTTTCTCCCTTTATACCTTCAAGTGAAGTGCCATTCCCGTCATCAGCAGAAGAAGCTGTTGTTGTTGCAGCAATGCTTGATCAAGATGCTGCAGCAAGCTATGGCGGGGGCGGAGGACTAATCTACGGTGGTGGAGGTGTTCCCAATTTGCTGACTCAGAAACCGTTAGGAAGCAGCATAGGTACGAAGAAAGATAGGCACAGCAAGATTCACACATCTCAGGGGTTGAGGGACAGAAGGGTGAGGCTTTCAAGCGAAATAGCGCGCAAGTTCTTTGATCTTCAGGACATGCTGGAGTTCGACAAGCCCAGCAACACGCTCGAATGGCTCTTCACCAAGTCTGAGAATGCAATCAAGGAGCTTGCAAGAAGCAAACATAGCTGCAGCTTCAGCTCCGGCGGCGAGAAATGCTCCTGTTGTGAAGGTAGTGATCAAGCAGCTGGGGTGGTGGTGGTGCACTCAAGCGAGAAATCATCTATGGCGGGAAGCAGTGATTCTTGTTCCAAAGGGAGGAACAAGTTGAAGTGGACACAGAGAGAAGATGTTTGTGTTCAGACAAAGAAGGAGTCAAGGGATAAAGCAAGGGCAAGAGCAAGAGAAAGAACTTGTTACAAAATGAACAACAACAACAACAACAACAACAATGGAAGATTAATGGTGCAAGATTTGGAAGACAGAACCCCTGCACTGCAACAATTTGAGCCTTGTGGAAGATGGTCTAATAACCCTCATCAGATTCTTCAACAACAACCTTACTATAACCCTCTTCGTCATCATCATCATCATCACATACTTGGAGATGCTTTTATTAACAATGTCATTGATGATTCTATCATGATTAAAAGGAACATGAATCGTGACCAAAACCTTATTGCTATCCCTAATAACAACAACAACAACATTATTGTTAATGATGATGACTACCAAAACCACTCGTCACCGTTCCTTTATTCAACTCCAAATTGGGACACCGACGAAACCATAAATGGTTGCTCCAACTTTCGTGCAATGGCAGCCACAATGAATAATCTATCAACATGCTTCACCGACCAGTAA 1233 0.429 MFSSTYDSNPFPNFPSSSSSSSYPNNNNNNNTLPFYIDPHNNNDFATTLLHHHDPSSLLVSPFIPSSEVPFPSSAEEAVVVAAMLDQDAAASYGGGGGLIYGGGGVPNLLTQKPLGSSIGTKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSENAIKELARSKHSCSFSSGGEKCSCCEGSDQAAGVVVVHSSEKSSMAGSSDSCSKGRNKLKWTQREDVCVQTKKESRDKARARARERTCYKMNNNNNNNNNGRLMVQDLEDRTPALQQFEPCGRWSNNPHQILQQQPYYNPLRHHHHHHILGDAFINNVIDDSIMIKRNMNRDQNLIAIPNNNNNNIIVNDDDYQNHSSPFLYSTPNWDTDETINGCSNFRAMAATMNNLSTCFTDQ 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03919 410 ProSiteProfiles TCP domain profile. 122 180 IPR017887 -
Aip09g03919 410 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 36 405 - -
Aip09g03919 410 Pfam TCP family transcription factor 121 267 IPR017887 -
Aip09g03919 410 ProSiteProfiles R domain profile. 247 264 IPR017888 -
Aip09g03919 410 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 36 405 IPR005333 GO:0003700
Aip09g03919 410 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03919 Aip-Chr9 145687686 145689051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03919 121 184 TCP Transcription Factor Family AT1G67260 70.312 1.46e-23 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip09g03919 TCP 9.5e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03919 - - adu:110275773 482.641