Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03907 ATGAAGGAAGAGAGAGAGTGTAAGATTGCAAAACGATCCAAGATGTCAAAGCTGTTCTCAAAGCACCTTCACCTCTGCTTCTTCAAGCTGAAGCACCATCCAACCATCCTCTCTCCGTCACCGTCACCGTCCACTCCCACAAGCACCTCCAACTTAACTACCTCCCACTCCTCCGAAGACCCACCTGACTTGGCCTCACTCTTCGCCTCCGACAGGTTCTTCTTCTCGTCGCCGGGCACCTCGAACTCCATCATAGAGTCCCCGGACACGCGTGCCTCCATACCAAGCGGCGGAGTGAAGGTTCCAAAGTACTCGGTGGACCCCTACGTGGATTTCTTCCGCTCAATGCAAGAAATGATTGCTTCACGACGGCGGGGTTTGGATGTGAACAAAGACTGGGACTATCTCCACGATCTTCTCTTGTGCTACCTGGCTCTCAATCCATCACACACCCACAGGTACATTGTTCGCGCCTTCACCGATCTCGTCGTTGACCTTTTGTCGTCTTCGTCGTCGTTGCCTTCACCGCCGGTAGTGAAATCCAAGTCTTGCCGGAGACTCAAGAACCATCGGCATAGTTCTAGTTTCTCAGGGCAGTTGGTGTAG 606 0.5297 MKEERECKIAKRSKMSKLFSKHLHLCFFKLKHHPTILSPSPSPSTPTSTSNLTTSHSSEDPPDLASLFASDRFFFSSPGTSNSIIESPDTRASIPSGGVKVPKYSVDPYVDFFRSMQEMIASRRRGLDVNKDWDYLHDLLLCYLALNPSHTHRYIVRAFTDLVVDLLSSSSSLPSPPVVKSKSCRRLKNHRHSSSFSGQLV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03907 201 Pfam Transcriptional repressor, ovate 105 166 IPR006458 -
Aip09g03907 201 ProSiteProfiles OVATE domain profile. 101 165 IPR006458 -
Aip09g03907 201 MobiDBLite consensus disorder prediction 37 61 - -
Aip09g03907 201 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 37 172 IPR038933 GO:0045892
Aip09g03907 201 PANTHER TRANSCRIPTION REPRESSOR OFP12 37 172 - -
Aip09g03907 201 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 100 168 IPR006458 -
Aip09g03907 201 MobiDBLite consensus disorder prediction 42 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03907 Aip-Chr9 145593865 145594682 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aip09g03907 Ovate 1.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03907 - - adu:107466913 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03907 09 145593865 145594682 Aip09g03907 09 145593865 145594682 ECH