Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03896 ATGAATGGTGGTGCAAGTGCTGAGGCAGAGGCAGAGTACTCTGAATTTGTGGAAGTTGATCCTAGTGGAAGATATGGAAGATATAATGAAATTCTTGGTAAAGGAGCTTCCAAGACAGTTTATAGAGCATTTGATGAGTATGAAGGGATAGAAGTTGCATGGAACCAAGTGAAGCTTTACGACTTTCTGCAGAATCCAGAAGACCTTGAGAGATTATACTGTGAAATTCATCTTCTCAAGACATTGAAACACAAGAACATCATGAAGTTCTACACTTCCTGGGTTGATACTACCAACAGACACATAAATTTTGTCACTGAGATGTTCACTTCTGGGACTCTAAGACAGTACAGGCTTAAACACAGAAGGGTTAACATCAGAGCTGTTAAGCATTGGTGCAGGCAGGTTTTGGAAGGGCTTCTCTATCTACACAGCCATGACCCTCCTGTGATCCACAGAGATCTCAAGTGTGATAACATTTTCATCAATGGCAACCAAGGAGAAGTTAAAATTGGGGATCTTGGCCTTGCTGCAATTCTTCGCAAATCTAATGCCGCTCGCTGTGTTGGCACACCTGAGTTTATGGCTCCTGAAGTATATGAAGAGGATTACAATGAATTGGTTGACATATACTCTTTTGGAATGTGCATGTTGGAGATGGTCACCTTTGAATATCCTTACAGTGAATGCAACCATCCTGCTCAAATTTACAAGAAAGTTTCCTCTGGGAAAATGCCAGAGGCTCTTTACAAAGTAAATGATCCCGAGGTTCGGCAATTCGTAGAGAAATGCTTAGCAACTGTGTCCCTCAGACTTTCAGCAAAGGAACTATTGGAGGACCCTTTTCTCCAACTTGATGATTATGGATATGACTTGAAACCATTCCAATATCAAAGAGACTGCTTTGAAGTAACCCCAATAATTAGACAGTCTCTTAATGGAATTCATAGCAGCAACACCACCTTAATGAGTGGCTCCACCGATAATCCTGGTGGTTATGGACCTGTATCTGAACTGGATTATCACCAAGATGATTTTGAAACAAGTGAAATAGATCTCTTTGATTGTGAGGAGGACGAAAAATTAGCTGAATTCGACGCCTCAATTAAAGGTAGGAGAAGAGAAGATGATGGCATCTTTCTGAGAATCAGAATAGCAGATAAGGAAGGTCGAGTTCGAAACATCTATTTCCCGTTTGACACCGAGACTGATACTGCATTGAGCGTTGCTTCTGAAATGATAGCTGAACTTGACATAACTGACCAAGATGTAACAAAGTTAGCAGATATGATAGATAATGAAATTGCAAACTTGGTCCCTGAGTGGAAAAGGGGACCCAGAATAGAGGAAAGTTTACAATGTGAAAGTGAAAATTTCTGCCACAATTGTGCTAGAAACGGTTCTTTATTTGATTATGCATCATCAGATAATCCATGTGCCAAGAATCTGCAATTTTTCCATTGTTCTAAGAACGGATGCGCAGCAGTTCATGGCAGATTCGAGGAGATTACTTATCAAGTTGAAGGGTCTGAAAACTGTGCTACAGAAGGTGCACAAGATCCATCATACCAACCCAAAGGCATTCGTTGTACTGATATCTGGGCGCAGCGCGATGAACCAGACTTGTGTTCTGAAGAGTTAAAAGACATACAATGTGATGACAAGTCTAATGAGACATCAAATCAATCAACCATCAAGGATGATGGAAGAACTATTGATGTGGATGACCAAAGTGATCTCAATGCTAGAAAGCTACCTTCTATTCCTTCGTCGGATTGTGTTCTTCTGGACTATGAGAATGAAATTAGACAAGAACTGAGATGGCTAAAAGCTAAGTACCAGATGCAGTTAAGAGAGCTTAGAGACCAGCAACTAGGGAGTAAACCAAAATTTGACACCGAAAAATTAGAGCTATCAGCTACATCCCACTCGAAGTTACAGGACAAGAAACCATTGCTGAGGCCTATGGTTTGTGGTAACAATTTTCTTGTTGATGCTGAGAAGTGCACAAGTTTGGCTGATCAAATGGTTCAAAATGGTGATGAGACAAGTGAGGCTAACAGTCCAGAACAAATGATCACAGCCAAGGATTTCTTTGCAGGAGCTTTGCTTCCACAGTCTCTTTACAGGGCCACTTCTCTTCCTGTTGATGCAGTAGATGTCTAG 2166 0.41 MNGGASAEAEAEYSEFVEVDPSGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQNPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTTNRHINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQVLEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCMLEMVTFEYPYSECNHPAQIYKKVSSGKMPEALYKVNDPEVRQFVEKCLATVSLRLSAKELLEDPFLQLDDYGYDLKPFQYQRDCFEVTPIIRQSLNGIHSSNTTLMSGSTDNPGGYGPVSELDYHQDDFETSEIDLFDCEEDEKLAEFDASIKGRRREDDGIFLRIRIADKEGRVRNIYFPFDTETDTALSVASEMIAELDITDQDVTKLADMIDNEIANLVPEWKRGPRIEESLQCESENFCHNCARNGSLFDYASSDNPCAKNLQFFHCSKNGCAAVHGRFEEITYQVEGSENCATEGAQDPSYQPKGIRCTDIWAQRDEPDLCSEELKDIQCDDKSNETSNQSTIKDDGRTIDVDDQSDLNARKLPSIPSSDCVLLDYENEIRQELRWLKAKYQMQLRELRDQQLGSKPKFDTEKLELSATSHSKLQDKKPLLRPMVCGNNFLVDAEKCTSLADQMVQNGDETSEANSPEQMITAKDFFAGALLPQSLYRATSLPVDAVDV 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03896 721 Gene3D Phosphorylase Kinase; domain 1 9 107 - -
Aip09g03896 721 Gene3D Transferase(Phosphotransferase) domain 1 109 288 - -
Aip09g03896 721 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 710 - -
Aip09g03896 721 MobiDBLite consensus disorder prediction 554 573 - -
Aip09g03896 721 SUPERFAMILY Protein kinase-like (PK-like) 29 284 IPR011009 -
Aip09g03896 721 Gene3D - 378 473 - -
Aip09g03896 721 ProSiteProfiles Protein kinase domain profile. 26 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03896 721 CDD STKc_WNK 24 283 - -
Aip09g03896 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Aip09g03896 721 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03896 721 SMART serkin_6 26 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03896 721 Coils Coil 603 623 - -
Aip09g03896 721 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 5 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03896 Aip-Chr9 145519577 145523280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03896 1 653 MAP Kinase Kinase Kinase AT3G22420 50.720 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aip09g03896 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03896 K08867 - gmx:100804179 1184.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03896 09 145519577 145523280 Aip09g03896 09 145519577 145523280 ECH