Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03863 ATGAAGGATTTCTTGGGTTCCGTTCGCCAATCCTTTGTCTTCAGAACTCCACCGCCAGCCACCGCCACCACCGACGAAGATGGACTATTCGCCGGAATCGTCGACCGGATCAGCTCCACCATCCGCAAGTCCCGCGTCGGACTCTTCTCTCAGCCCCGCCTCAAGCATCCCCGTCTTCCTTCGCCGCCGACACCTCCCAAGTGCTCCGACGACGCCCCTCCTTTCCGGTGGCGGAAGGGCGAATTGATCGGCAGCGGCGCCTTCGGTCGAGTGTACATGGGCATGAATCTCGACTCTGGCGAGCTTATTGCTGTCAAACAGGTTTTGATTGCGCCTGGTTGCGCTTCAAAGAAGAATACTCAGGCTAATAATATTCGGGAGCTTGAAGAAGAAGTGAAGCTTCTCAAGAATCTTAAGCATCCAAACATTGTTAGATACTTGGGAACCGCTAGAGAGGAGGATTCCTTAAATATTCTACTGGAGTTTGTTCCCGGTGGGTCTATCTCTTCGCTCCTTGGGAAATTTGGATCATTCCCTGAGCCAGTTATCAAAATGTATACAAAACAGCTTCTACTGGGCCTTGAATACCTTCATGATAACGGGATTATTCACAGAGATATTAAGGGTGCAAACATTCTAGTTGATAACAAAGGGTGCATCAAACTAGCGGACTTCGGTGCATCCAAAAAAGTTGTTGAACTGGCAACTATAAATGGTACGAAGTCAATAAAGGGTACGCCGCATTGGATGTCTCCTGAAGTCATTTTACAGACAGGACATACAATCTCTACTGACATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACAGGGAAACCTCCATGGAGTCAACAGTATCCTCAGGAGGCTTCTGCTCTTTACTACATTGGTTCAACTAAATCTCATCCACCCATACCTGAATATCTGTCTGCCGAGGCACAGGACTTTTTGCTGAAATGCTTCCACAAGGAACCAGATCTGAGGCCTTCTGCATCAGACTTGCTACTGCATCCTTTCATCTCCTGCAATTACCGCGAGTCTCATTCGATGTTATGCAGTTCAATCAGGGACTCTTGCAATGCAACACATGAGAAGAAACCTAGAGACTTTTTGGATTCTGTTCGGGGATCAACCTGCACAGGCGTGAAGGATGTCTGTCAACTGGATAGCATAAGACTCTCAACTATGTGTTCTGAAAATTTTCTAAATGCAGATTACTACCAGAGAGCTGACAGCAATGATGATGACATATGTCAGATACATGATGAAGATGATTTTTTAGTTGACACATCAGTAAAACCAAAATCTCTATCTACTTCTGAAGATATAAAGAGTTTCAATCCAATGTGTGAACCTGTGGATGACTGGCCTTGCAAGTTTGATGAAGATCTAAATTTAAAGGAAAGCAGAATGAACTTGTCTTCAGCTCAAGCTGCTAATGAAACTAGGACAGGTGCTGAACCATATCCTGACGTGAAGGATAAATTCTCATTTTCATGTGAGCATTTAGGAGATGAAGATGATGATGAAGTTACCGAGTCCAAAATTAAAGCCTTCCTGGATGAGAAGGCCTTTGAACTGAAGAAACTCCAAACACCTCTTTTTGAAGAATTCCTTAGTGTTTCAAATGCAGCCATTGCACCTATTGCAATTGCACCAAGTAATGATGTTTCGAAAATCCCAAATGCAACATCACAGGGTAGATCTCCTAGTCATGCTAGGAGACGATTGTCAATGGCTGGTAGTGCCAGTGTTTCAAGCAGTAAGAGTCATAACAAATATCAACCACAACTTGGTGGTGCACCGAATCAACCTTTGCAGGAAATCCAGCCTTCTGATCTTAACGAATCAAAGGAGACTCTTCATGAAGCTCAGCCAGGTTCATTCAGTGTCAAGGCGAGCTTCTCTGAGAGACAAAGAAAATGGAAAGAAGAACTTGTTAAAAGAAAATGGAAAGAAGATCTTTTTAAAGAGATGGACTTTAAGCGAGAGATTTGGCGTAAGGCAGGATTAGGAGGGAAGATAACTTCACCGAAGGATCGCGAGTTTTATGGAGACTGA 2064 0.4443 MKDFLGSVRQSFVFRTPPPATATTDEDGLFAGIVDRISSTIRKSRVGLFSQPRLKHPRLPSPPTPPKCSDDAPPFRWRKGELIGSGAFGRVYMGMNLDSGELIAVKQVLIAPGCASKKNTQANNIRELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPEPVIKMYTKQLLLGLEYLHDNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGTKSIKGTPHWMSPEVILQTGHTISTDIWSVACTVIEMATGKPPWSQQYPQEASALYYIGSTKSHPPIPEYLSAEAQDFLLKCFHKEPDLRPSASDLLLHPFISCNYRESHSMLCSSIRDSCNATHEKKPRDFLDSVRGSTCTGVKDVCQLDSIRLSTMCSENFLNADYYQRADSNDDDICQIHDEDDFLVDTSVKPKSLSTSEDIKSFNPMCEPVDDWPCKFDEDLNLKESRMNLSSAQAANETRTGAEPYPDVKDKFSFSCEHLGDEDDDEVTESKIKAFLDEKAFELKKLQTPLFEEFLSVSNAAIAPIAIAPSNDVSKIPNATSQGRSPSHARRRLSMAGSASVSSSKSHNKYQPQLGGAPNQPLQEIQPSDLNESKETLHEAQPGSFSVKASFSERQRKWKEELVKRKWKEDLFKEMDFKREIWRKAGLGGKITSPKDREFYGD 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03863 687 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 59 578 - -
Aip09g03863 687 Pfam Protein kinase domain 78 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03863 687 Coils Coil 118 138 - -
Aip09g03863 687 Gene3D Transferase(Phosphotransferase) domain 1 76 376 - -
Aip09g03863 687 SUPERFAMILY Protein kinase-like (PK-like) 76 342 IPR011009 -
Aip09g03863 687 MobiDBLite consensus disorder prediction 558 573 - -
Aip09g03863 687 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Aip09g03863 687 ProSiteProfiles Protein kinase domain profile. 77 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03863 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Aip09g03863 687 SMART serkin_6 77 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03863 687 MobiDBLite consensus disorder prediction 616 635 - -
Aip09g03863 687 MobiDBLite consensus disorder prediction 581 610 - -
Aip09g03863 687 MobiDBLite consensus disorder prediction 557 610 - -
Aip09g03863 687 PANTHER MAP KINASE KINASE KINASE 59 578 - -
Aip09g03863 687 CDD STKc_MAPKKK 76 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03863 Aip-Chr9 145197725 145202603 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03863 1 675 MAP Kinase Kinase Kinase AT3G06030 54.399 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip09g03863 Pkinase 3.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03863 - K20606 gmx:100795863 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03863 09 145197725 145202603 Aip09g03863 09 145197725 145202603 ECH