LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip09g03840	ATGAGTCCCTTCTACTTGTTCCTTCTGCTTCCATCTTTCTTCTTCTTCTTCCTCCCCATTCACTGCTTTAACATCATCCAAGGAGCCACCGATAAAAATACTAAAGCTTATTATAACTGCACAATCAATGGCACTTTTGCATCCAATAGCACATACCGTTCCAACACCATAACACTCCTTAACTGGCTCTCCTCCAATGCCACCACTTCCAGAACCTACAACACTACAGTAATTGGTAAAACAACTTCAGACACAGTCTATGGACTCTACATTTGTACAAGAGACAGCACACCAGGAATGTGCCAAGACTGTGTGGCACAAGCATCAAAACTTATCTCATCTCTTTGTAGCAAAGCAAAAGAAGCCATGGTTTGGTACCGTGTATGCTTTATGCGTTACTCTAATCGTAATTTCTTCTCCAATGTGGAGGAAAGTCCAAGTATCACCTTTGTGAGTGACATTGACTATGTGGGTCAAGTTGGGCGCTACAACACTATTCTCTGGAATATGCTGAATGATATGAGAACTATGGCCGCTGCTGATTCAAATAAAACGGCTGCAATGACTCAGAAAATCACAGATCATCAAAACATATATGGTTCCGCTTGGTGTCTCCCTTATCTTTCCACCGAGAACTGTAGCTGGTGTCTCAGTGATGCCATTGCATATATTCCAGCAGGTTGCTGCAGGGGAAAATCTGGAGGAACTGTGATGTATCCCAGTTGTGGTATTAGATATGAATTATATCCATTCCTTAAGGAACACTATATAGTTCCTCCGCCGCTGCGGCCGCCACCACCACCGCAAAGAGATTCTCGTCCTTTGGCTCCACCAGGTAAACGAAAGCAGAAGAACTTACCATTAAGTAAAGTCGCTGTTCCAATTGCCATTGTCGTTGCACTTGTGCTTTTAACTTTGGGTGGTTGCTGCTTTCTACGTAGAAAAGGAAGAAAGAATCAAGATGATATTCTCAAAGAAAACTTTGGGAATGATATAAGCACTTTGGAGTCCTTGCGATTTGAACTAGCCAGGATTGAAGCTGCAACAAATAGATTTGCCACAGAGAACAGGGTAGGCAAAGGTGGATTTGGAGAAGTCTATAAGGGTATTCTTTTAAATGGACAAGAAATTGCTGTGAAGAGGCTTACTAGAAGCTCTGGACAAGGTGCAATAGAGTTTAAAAATGAGATTCTTGTTATAGCTAAGCTTCAACACAGAAATCTAGTGAGGTTACTGGGATTTTGCTTGGAAGGTGAAGAAAAGATACTCATCTATGAGTATGTGCCAAACAAAAGCCTTGACTACTTTCTTTGCGATCCTCAAAAGCGAAGACAATTATCTTGGATTCAACGTAAACAGATCATCATGGGAATTGCTAGAGGAATTCTATACTTGCATGAAGATTCTCGCCTCAAAATAATACACCGTGATCTAAAACCTAGTAATGTTTTGTTAGATAGTAATATGAATCCAAAAATATCAGATTTTGGCATGGCTAGAATTGTTACTGTGGATCAAAACGAAGAAAACACACATAGAATAGTCGGAACATATGGTTATATGTCTCCAGAATACGCAATGTTTGGACAATTCTCCGTAAAATCGGATGTGTTTAGTTTTGGAGTCATGGTACTCGAGATTATTAACGGGAAGCGAAAAGGAACCTCCTCTTCTGAATCAGAGTGTATTGATGACATCCGGAGACATGCTTGGGAAAAATGGACAGAGAAAACGCCAATGGAACTATTAGATCCTAACATGGAAGGCCCTTATTCAAAGGAAGAAGTCATAAAATGCATTCACATTGGTTTGTTATGTGTTCAAGAAGAACCAAATGAGAGACCTACGATGGCAACAATTGTTTTTTACCTAAATAGCTCTTCACTCAACTTGCCATCCCCTCGTGAACCAGCATATTATTTCAAGAACAATAGAACAGAGGAAAGCATGACAACCAGCAAGGAGTTGGTTAATGACAGCGATTCCATCAATGAAATCACCATAAGTAAATTCTTTCCTCGTTAA	2025	0.403	MSPFYLFLLLPSFFFFFLPIHCFNIIQGATDKNTKAYYNCTINGTFASNSTYRSNTITLLNWLSSNATTSRTYNTTVIGKTTSDTVYGLYICTRDSTPGMCQDCVAQASKLISSLCSKAKEAMVWYRVCFMRYSNRNFFSNVEESPSITFVSDIDYVGQVGRYNTILWNMLNDMRTMAAADSNKTAAMTQKITDHQNIYGSAWCLPYLSTENCSWCLSDAIAYIPAGCCRGKSGGTVMYPSCGIRYELYPFLKEHYIVPPPLRPPPPPQRDSRPLAPPGKRKQKNLPLSKVAVPIAIVVALVLLTLGGCCFLRRKGRKNQDDILKENFGNDISTLESLRFELARIEAATNRFATENRVGKGGFGEVYKGILLNGQEIAVKRLTRSSGQGAIEFKNEILVIAKLQHRNLVRLLGFCLEGEEKILIYEYVPNKSLDYFLCDPQKRRQLSWIQRKQIIMGIARGILYLHEDSRLKIIHRDLKPSNVLLDSNMNPKISDFGMARIVTVDQNEENTHRIVGTYGYMSPEYAMFGQFSVKSDVFSFGVMVLEIINGKRKGTSSSESECIDDIRRHAWEKWTEKTPMELLDPNMEGPYSKEEVIKCIHIGLLCVQEEPNERPTMATIVFYLNSSSLNLPSPREPAYYFKNNRTEESMTTSKELVNDSDSINEITISKFFPR	674

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip09g03840	674	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	473	485	IPR008271	GO:0004672\|GO:0006468
	Aip09g03840	674	Gene3D	Transferase(Phosphotransferase) domain 1	428	632	-	-
	Aip09g03840	674	ProSiteProfiles	Gnk2-homologous domain profile.	144	251	IPR002902	-
	Aip09g03840	674	ProSiteProfiles	Gnk2-homologous domain profile.	34	138	IPR002902	-
	Aip09g03840	674	CDD	STKc_IRAK	358	625	-	-
	Aip09g03840	674	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	11	674	-	-
	Aip09g03840	674	Gene3D	Phosphorylase Kinase; domain 1	315	427	-	-
	Aip09g03840	674	MobiDBLite	consensus disorder prediction	260	274	-	-
	Aip09g03840	674	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	11	674	-	-
	Aip09g03840	674	Gene3D	-	151	251	IPR038408	-
	Aip09g03840	674	Gene3D	-	32	138	IPR038408	-
	Aip09g03840	674	Pfam	Protein tyrosine and serine/threonine kinase	354	621	IPR001245	GO:0004672\|GO:0006468
	Aip09g03840	674	ProSiteProfiles	Protein kinase domain profile.	352	629	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aip09g03840	674	Pfam	Salt stress response/antifungal	40	135	IPR002902	-
	Aip09g03840	674	Pfam	Salt stress response/antifungal	161	249	IPR002902	-
	Aip09g03840	674	SUPERFAMILY	Protein kinase-like (PK-like)	338	649	IPR011009	-
	Aip09g03840	674	MobiDBLite	consensus disorder prediction	260	283	-	-
	Aip09g03840	674	ProSitePatterns	Protein kinases ATP-binding region signature.	358	380	IPR017441	GO:0005524
	Aip09g03840	674	SMART	serkin_6	352	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip09g03840	Aip-Chr9	145025047	145028184	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip09g03840	12	674	Receptor kinase-like Gene Family	AT4G05200	44.169	0.0	564

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Aip09g03840		PK_Tyr_Ser-Thr	1e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip09g03840	-		-	gmx:100793219	897.886