Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03839 ATGGCTTCCTTCAATGTATTATTCTTCGTCCTTATTAGCATCCTCAACTTTTCATCAATTACTACAAAAGCAGAGGACACTCATTTTCTCTACCAGGTTTGCTCAAAATACAGATTCACTCCGATCAACACCACCTACCAAAACAACCTCAGGACCCTCCTCTCTTCCTTATCCTCCAAGGCCACCCACAACACCGAATTCTACAACAACACCGTCACCGGAAAAACCCCCGCCGACACAGTCTATGGACTATACATGTGCAGAGGAGACATACCCTCTGAGCTATGCGGCGAGTGCGTGGGAAACGCAAGTCAAAGACTTTCAACAAACACAGAGTGTTCACTCTCCATAGCGGCAGTTATGTGGTACGACGAGTGCATGGTAAGGTACTCAAACACGTCGTTCTTCTCGCGCGTGACGGTGGCGCCTGGCTACCCTGGCTACGCGTTGTCCAGCCCCACCAACATGACAGACCAACAAAGCTTCAACCGTTTATTGTATCGAACCTTGAATCAAACTGCGGACGAAGCGGCCAACGCGCCCATCGGTGCAAAGAAGTTCGCTACAAAGGAAGCTGCGATATCCATATTCCAGAATCTTTATTGTCTTGCTCAGTGCACGCCGGATCTGTCGCCGGAAGATTGTAGAAGCTGTTTGGATGGTTTGATCAATTCGAACCTTCCTGAGTGCTGTGCAGGAAAGCAAGGAGGGAGGATTCTGTACCCTAATTGCAATATTCGGTTTGAGATTTACCCTTTCTATCGATCACTTCAACCTGCACCGTCCCCAGCACCATCATCAAATTCCAGAGGTATGTATAACTCAAAGATCAAAGATCCTGTTTATCTTAATTGCACTTGCTCGAGTAACAATAAAGCCTCAGACTCCGATAAGGACTTCCAGTTACATATCCGCACCCTCCTCGATTCCTTGTATTCCAACGCCACCAGCGGTAACTTGTTTAAGAAGGTGGAAGCAGGTATAGTGTCTGGGCTCTTCATGTGCCGTGGTGACCTTCCGTCCCGCCTCTGCTCACAGTGCGTGGTCCTTGCAAAAGATCGAATTTGGTCCAACTGCCGCTTCTCCAAAGAGGCTGTTATTTGGTACAGTCACTGCTTGCTTCGCTATTCCGAAGCAGATATCCGCTCGACGTATATAGCAAGTCCTTTGTTTAGCGAGTTCAACATGACCAGCAGCTTCATTTCTACCCAGCAGCAAAACTTCTTCAATACTCTATCTGGTATTTTACTTAGATTGACCAACCTCACAGGTGACAATGGTAACCGATATTTGACAGATAAATCAAAATTGAATCCCTTTCAAACTCTTTACACTCTGGCTCAGTGTACGCCAGATCTCTCCAGCGATGACTGCACAAACTGTCTCCGTGATGTGATTGGATCAGCAATACCATGGGCTCGTTTGGGAAGTGTCGGTGGAAGAGTTCTATGTCCTAGCTGCACTCTTAGGTTTCAATTATTCCAATTTTACAGAGCTGATGATGATGCTCCACCTCCTGAGCTGCCTGGAAGTAGTGGACTATCATCCGGGACTATTGTTGCAATTGTGGTTCCAATTGCAGTGGCTGTGCTACTGTTTGTTGCGGGCGTTTGTTTCTTAATTAGAAGAAGAGCAAGGAAGAAGCATGACTCTGCACAAGATCCACAAACTGTGACCGAGATCTCTAGCATTGATTCGTTGAGATTCGATTTGAGTACAATTGAAGCAGCCACAAAGAAATTCTCTCAAGATAACAAGCTTGGAGAAGGTGGATTTGGTGAGGTTTACAAGGGCTTGCTTCCAAGTGGACAAGAAGTAGCTGTTAAGAGGCTCTCTAAAGGATCTGTACAAGGTGGAGAAGAATTCAAGAATGAAGTAGAGCTGGTTGCCAAGCTTCAACATAGATATCTAGTCAGGCTTTTGGGATTTTGCTTGCAAGGAGAAGAGAAGATACTTGTATATGAATATGTACCCAACAAAAGCTTGGACTACATTCTTTTCGATCCTGAGAAACAAGGATTGTTGGATTGGACAAGACGATACAAGATTATTGGAGGCATTGCTCGAGGAATTCAATATCTCCATGAAGATTCTAGACTTAAAATCATACATCGTGATCTTAAACCTAGCAACATATTGTTGGATGAAGATATGAATCCAAAAATTGCAGATTTTGGTATGGCAAGGTTATTTGCTGTTGATCAAACTCAAGGAAATACTAGCAGGATTGTTGGGACATATGGCTACATGTCCCCGGAATATGCGATGCGCGGAGAGTTCTCGGTTAAGTCTGATGTATACAGTTTTGGAGTCCTTGTTTTGGAGATTATAAGTGGCAAGAAGATAAGCTCTTTCTATGAAACAGATGCTGATGACCTAGTGAGCTATGCTTGGAAACTTTGGAAGGAAGGGACACCCTTGGAATTGATGGATCCCACGTTGAGAAAATCTTATACTCCAAATGAAGTTATGAGATGCATCCATATTGGTTTACTCTGTGTCCAAGAAGATCCAGCAGATAGACCTACAATGGCAACAATAATGCTTATGCTGGATAGTTATTCTGTTACTCTACCAGTACCTAATCAGCCAGCATTTGTCGTGCACAGCGGAACTGATTCAAACATGCTGCAATTCAGTGAACCTACAACCAATGTATCAGTGCAAACTTCTGTCAATGAGATGTCGGTTAGCGAAATGGATCCTAGATAA 2712 0.4428 MASFNVLFFVLISILNFSSITTKAEDTHFLYQVCSKYRFTPINTTYQNNLRTLLSSLSSKATHNTEFYNNTVTGKTPADTVYGLYMCRGDIPSELCGECVGNASQRLSTNTECSLSIAAVMWYDECMVRYSNTSFFSRVTVAPGYPGYALSSPTNMTDQQSFNRLLYRTLNQTADEAANAPIGAKKFATKEAAISIFQNLYCLAQCTPDLSPEDCRSCLDGLINSNLPECCAGKQGGRILYPNCNIRFEIYPFYRSLQPAPSPAPSSNSRGMYNSKIKDPVYLNCTCSSNNKASDSDKDFQLHIRTLLDSLYSNATSGNLFKKVEAGIVSGLFMCRGDLPSRLCSQCVVLAKDRIWSNCRFSKEAVIWYSHCLLRYSEADIRSTYIASPLFSEFNMTSSFISTQQQNFFNTLSGILLRLTNLTGDNGNRYLTDKSKLNPFQTLYTLAQCTPDLSSDDCTNCLRDVIGSAIPWARLGSVGGRVLCPSCTLRFQLFQFYRADDDAPPPELPGSSGLSSGTIVAIVVPIAVAVLLFVAGVCFLIRRRARKKHDSAQDPQTVTEISSIDSLRFDLSTIEAATKKFSQDNKLGEGGFGEVYKGLLPSGQEVAVKRLSKGSVQGGEEFKNEVELVAKLQHRYLVRLLGFCLQGEEKILVYEYVPNKSLDYILFDPEKQGLLDWTRRYKIIGGIARGIQYLHEDSRLKIIHRDLKPSNILLDEDMNPKIADFGMARLFAVDQTQGNTSRIVGTYGYMSPEYAMRGEFSVKSDVYSFGVLVLEIISGKKISSFYETDADDLVSYAWKLWKEGTPLELMDPTLRKSYTPNEVMRCIHIGLLCVQEDPADRPTMATIMLMLDSYSVTLPVPNQPAFVVHSGTDSNMLQFSEPTTNVSVQTSVNEMSVSEMDPR 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03839 903 Gene3D Transferase(Phosphotransferase) domain 1 657 858 - -
Aip09g03839 903 ProSiteProfiles Gnk2-homologous domain profile. 144 253 IPR002902 -
Aip09g03839 903 ProSitePatterns Protein kinases ATP-binding region signature. 587 609 IPR017441 GO:0005524
Aip09g03839 903 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 5 273 - -
Aip09g03839 903 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 289 901 - -
Aip09g03839 903 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 273 - -
Aip09g03839 903 ProSitePatterns Serine/Threonine protein kinases active-site signature. 702 714 IPR008271 GO:0004672|GO:0006468
Aip09g03839 903 Gene3D Phosphorylase Kinase; domain 1 542 656 - -
Aip09g03839 903 SMART serkin_6 581 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03839 903 CDD STKc_IRAK 587 852 - -
Aip09g03839 903 Pfam Protein kinase domain 582 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03839 903 ProSiteProfiles Gnk2-homologous domain profile. 280 381 IPR002902 -
Aip09g03839 903 Gene3D - 147 253 IPR038408 -
Aip09g03839 903 Gene3D - 280 380 IPR038408 -
Aip09g03839 903 Gene3D - 25 135 IPR038408 -
Aip09g03839 903 Gene3D - 391 496 IPR038408 -
Aip09g03839 903 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 289 901 - -
Aip09g03839 903 ProSiteProfiles Protein kinase domain profile. 581 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03839 903 ProSiteProfiles Gnk2-homologous domain profile. 27 135 IPR002902 -
Aip09g03839 903 ProSiteProfiles Gnk2-homologous domain profile. 389 496 IPR002902 -
Aip09g03839 903 Pfam Salt stress response/antifungal 287 378 IPR002902 -
Aip09g03839 903 Pfam Salt stress response/antifungal 403 492 IPR002902 -
Aip09g03839 903 Pfam Salt stress response/antifungal 38 132 IPR002902 -
Aip09g03839 903 Pfam Salt stress response/antifungal 154 250 IPR002902 -
Aip09g03839 903 SUPERFAMILY Protein kinase-like (PK-like) 566 889 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03839 Aip-Chr9 144951900 144999308 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03839 279 903 Receptor kinase-like Gene Family AT4G05200 49.619 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip09g03839 Pkinase 9.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03839 - - gmx:100798426 874.774