Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03835 ATGGCTACCATGACCATAGCTTCCGAAAACTTGCTCTTACTTCTTTCTGTCCTTGTCATCTTCACGTCTCTAGCCACCTCTCTACCAGATTTTGTACACTATCTCTGTAAAGACAACAATGGTAACTACACAGCTAACAGTACCTACAGTTCAAACCTCAATACCCTTTTGTCCAACCTCTCTTCTATCATTGGAACCAGCAACAACTACCAATTCTACAATGTCTCCAATGGCAAAACCACAGACAAAGTTAACCTCATCTGGATGTGCAGAGGAGATGTTACTAAAGAAGATTGCCTTAGCTGTTTGAACGATTCAAGAATCCTTCTGCCAAATGTTTGTCCAAACCGGAAGGAGGCAACAGGGTGGTATGATTACTGCATGTTACGCTACTCGAACCGGTCCATATTTGGGATCATGGACTCCACTCTGTGGGAGATACATAACAATGGGAATGTAAGTGATGTGAATGAGTTCAACCAAGTTGCTGCAGACTTGATGCAAAATCTAAGAAGCAAAGCTGCTGCAATTTCTGGTGAATCTCTGATCAAGTTTGATGCAGGGGAAGCCAAAGTAGGGGCAGGATTTCAAACCGTGTATGCTCATGTACAGTGCACTAATGATTTGTCAGAGCTAGAATGCAATGATTGCTTGTCTGGAGGAATCTCCTACATCCCAACTTGCTGTAATGGAAAGAAACGTGTAAGAATTTTTACCCCCAGTTGTAATCTTAGATATGACACACAGCTTTACTTTGATTCTCTAAGCGTTCTGTCACCTCAACCATCTCTATCTCCTGCTCCATCATCCACTACTGCCACTGCTACGCTCAAACAAGGAAAGAGCAACTTATCATCAACAACTGTGATTGCCATAGTTGTGCCGGTCGTCTCCCTTATTATTCTGCTGCTCATAACCTTTGTCTGCATCTATTTCAGAAGGAAGAAGAAACCAACCAAGTATTTTGAAACTCAAGGTGAATCAGAAGCTGACTGTGAAATTGAACCTATTGAGACATTACAATTCGACTTTCAAACCATCATGGACGCTACGAATAACTTCTCAGTTGCAAATAAGCTTGGAGAAGGTGGATTTGGAATTGTCTACAAGGGTAGACTACCAAATGGCGAAGAGGTTGCTATCAAAAGATTGTCAAGGAATTCTGACCAAGGAGATATAGAATTCAAGAATGAGCTGCTATTGGTAGCAAAGCTTCAACATCGAAATTTAGCAAGGCTACTTGGCTTTTGTTTGGAAATAGGAGAGAGGATACTGGTCTACGAGTTTCTTCCCAATAAAAGCCTTGATTACTTCATATTTGATCCAGTCAAGCGTTTACTTTTGGATTGGGAAGGACGCTATAAGATTATAGAAGGAATCGCTCGAGGTCTTCTTTATCTACACGAGGATTCTCAATTGCGTATTATCCATCGTGATCTAAAAGCAAGTAACATACTCTTAGATGAGAAAATGAATGCAAAGATATCAGATTTTGGTATGGCAAGGTTGTTTGTTGAGAATCAAACTCGAGGAAACACACTTAGAGTTGTTGGAACTCATGGATATATGGCACCAGAATATGCATTGCATGGACAATTTTCAATAAAGTCAGATGTTTTTAGTTTTGGTGTACTACTTCTTGAGATAGTGAGCGGACACAAAAATGGAGACATTCATAATGGCGAGTACGTTGAACATCTAATAAGCTTTACTTGGAAAAAATGGATGGAAGGGTCTGACTCAGTCTCAGATATTGTAGATCAAACATTGGAGAGTAGTAGATTCAGAAATGAAATAACGAGATGCATCCATATTGGATTGTTATGTGTTCAAGAAAATGTAGCTGATAGACCAACCATGGCTACGGTTGTAATGATGCTTAATAGTGAATCGGTCATTCTTCCCATCCCTTCAAAAGCAGCATATGTTACTATGAATAATGCCGGAGATTTATCGAATGGAAGAAGATTAGGTGAATCAGGAAACTATGCTCTGCAAACATCATCAGGAGCAAATGAGGCTTCGATTACTGATCCTCATCCTCGTTAG 2049 0.4017 MATMTIASENLLLLLSVLVIFTSLATSLPDFVHYLCKDNNGNYTANSTYSSNLNTLLSNLSSIIGTSNNYQFYNVSNGKTTDKVNLIWMCRGDVTKEDCLSCLNDSRILLPNVCPNRKEATGWYDYCMLRYSNRSIFGIMDSTLWEIHNNGNVSDVNEFNQVAADLMQNLRSKAAAISGESLIKFDAGEAKVGAGFQTVYAHVQCTNDLSELECNDCLSGGISYIPTCCNGKKRVRIFTPSCNLRYDTQLYFDSLSVLSPQPSLSPAPSSTTATATLKQGKSNLSSTTVIAIVVPVVSLIILLLITFVCIYFRRKKKPTKYFETQGESEADCEIEPIETLQFDFQTIMDATNNFSVANKLGEGGFGIVYKGRLPNGEEVAIKRLSRNSDQGDIEFKNELLLVAKLQHRNLARLLGFCLEIGERILVYEFLPNKSLDYFIFDPVKRLLLDWEGRYKIIEGIARGLLYLHEDSQLRIIHRDLKASNILLDEKMNAKISDFGMARLFVENQTRGNTLRVVGTHGYMAPEYALHGQFSIKSDVFSFGVLLLEIVSGHKNGDIHNGEYVEHLISFTWKKWMEGSDSVSDIVDQTLESSRFRNEITRCIHIGLLCVQENVADRPTMATVVMMLNSESVILPIPSKAAYVTMNNAGDLSNGRRLGESGNYALQTSSGANEASITDPHPR 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03835 682 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Aip09g03835 682 ProSiteProfiles Gnk2-homologous domain profile. 141 251 IPR002902 -
Aip09g03835 682 MobiDBLite consensus disorder prediction 662 682 - -
Aip09g03835 682 Gene3D Phosphorylase Kinase; domain 1 317 429 - -
Aip09g03835 682 Pfam Salt stress response/antifungal 36 133 IPR002902 -
Aip09g03835 682 Pfam Salt stress response/antifungal 151 248 IPR002902 -
Aip09g03835 682 SMART serkin_6 354 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03835 682 CDD STKc_IRAK 360 628 - -
Aip09g03835 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Aip09g03835 682 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 656 - -
Aip09g03835 682 Pfam Protein tyrosine and serine/threonine kinase 356 626 IPR001245 GO:0004672|GO:0006468
Aip09g03835 682 ProSiteProfiles Protein kinase domain profile. 354 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03835 682 ProSiteProfiles Gnk2-homologous domain profile. 31 136 IPR002902 -
Aip09g03835 682 Gene3D - 29 135 IPR038408 -
Aip09g03835 682 Gene3D - 141 250 IPR038408 -
Aip09g03835 682 SUPERFAMILY Protein kinase-like (PK-like) 339 641 IPR011009 -
Aip09g03835 682 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 11 656 - -
Aip09g03835 682 Gene3D Transferase(Phosphotransferase) domain 1 430 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03835 Aip-Chr9 144930030 144932972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03835 29 643 Receptor kinase-like Gene Family AT4G21410 49.126 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip09g03835 PK_Tyr_Ser-Thr 8.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03835 - - gmx:100782266 786.563