Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03834 ATGAGAATGAGGATGATCACAAATAGAACTAGTAGTTTGTTTTCCATTTTTTGTTGCCTCCTTTGTTTGTTAATCATATCTACTCAAAGCTGCTGCTACGCACAAGAAGATGGTTTCCGATCGTACTCCTGTGACAACGGAAAAGGAAACTACACAGCAAACAGCATCTACCACAAAAACCTCAACACCCTTCTCTCCACTCTCATCTCCAACACTCAAATCGACTACGGTTACTACAACTTCTCGTACGGCCAAGACGACAACAAAGTAAACGCCGTTGGGCTTTGCCAAGGAGATCTTAACCAAAACGATTGTCGTCTCTGCCTCAACAATTCCATAACCCTTCTCACACAGCTTTGTCCAAACCAGAAGGAAGCCATAGGCTGGTACGACACCTGCATGCTCCGCTACTCTAACCGCACCATCTTCGGCAACCACCACGTCGATGATTCCCTTACGGTTTACCTGTGGAACACCCAGAACGCCACGGACTTGCCCGTGTTTAATCAAAACCTCAACAGCTTGATGTCAAACCTAATAGACAAGGCCATTGCCGGCGACTCTCGCCGGAAATACGCGGCGGCGAGCGTCAACAGTACGGGCTTTCAAAACATATATGGAGTTGTGCAGTGCACGCCGGATCTGTCTAGCCTAGAGTGTGATCAATGCTTGGAGGGGCATGTCTCAGATATTCCGGCTTGTTGTGATGGGAAGAAAGGTGGGAGGGTTCTTTCTCCAAGTTGTTACATTAGATATGAAGTTTACCCCTTCTTTCAGCCTACTGCCGCTAATAATGCACCGCCTCCATCGTCGTTGTCGCAGCCACCACATTCCTCCTCCACCCCTACTTCCTCTTCGGAAGGTCAAGGTCAAGGAAAGACCAACACATTGCGAATTGTCATCTTCGTAGCAGTGCCAACTGTTATTGTTTCCGTGCTCATCGGTTCTATATGCATCTATTTATTAAGAGTAAGAAAGCCAAGGAGGACTTCTGAAAGCAATTCGTCTGATGAAGGTGTTGAACAAGAGATTATAACCAATGAGTCATTGCAATTTGACTTTGATACCATCCGAGTTGCTACAGATGATTTCTCGAATTCTAATAAACTAGGACAAGGTGGATTTGGAGCTGTTTATAAGGGGAGACTCTCCAATGGACAAATGATTGCTGTGAAAAGGCTGTCAAGGGACTCAGGACAAGGAGCTACGGAATTTAAGACTGAAGTGCTTTTATTGGTCAAGCTTCAACATCGAAATTTAGTTAAACTTCTTGGTTTTTGTTTGGAAGGAAGTGAAAGATTACTTGTTTATGAATTCGTTCCTAACAAAAGTCTTGATTACTTCATATTTGATCCTATCAAGAGAAATCAACTGAATTGGGCAAGCCGATATAAAATCATTGAAGGTGTTGCTCGAGCTCTTCTTTATCTTCACGAAGATTCTAGGTTGCGCATTATACATCGGGATCTTAAAGCAAGTAATATCCTCTTAGACGACAACATGAATCCTAAGATAGCAGATTTTGGATTGGCAAGATTGTTTGACAGAGATCAAACTCAAGGAAATACTAATCAAATTGCCGGAACCTATGGATATATGGCACCCGAATATGCAATGTATGGACAATTTTCAACGAAGTCAGATGTATTTAGCTTTGGTGTAATAGTGCTTGAAATTTTGAGTGGCAAAAGACACATTGGGAATGGCAATGGGGAGAGTGAAGAACAGCTAATAAGCTTTGTATGGAGAAATTGGAGGGAAGGAACAGCTATAAATATTGCAGATCCATCATTAAGCAACATTTCACCAAATGAAATTATGAGATGCGTCCACATTGGTTTACTTTGTGTTCAAGAAAATTTAGCAGATAGGCCAAACATGGGTTCTATTGTATTAATGCTTAATAGTTATTCTGTGACTCTGCCCACACCTTCAGAACCTGCATTTTTTGTGGGGAGTAGAACTAGAAGCCGTCCATTATCAGATATACAATCAGGGGGGAATAATTCATCAACAAGTAATAAATCAGCTCAAGCATCAGAAAATGAAGCTTCCATTACTGACCTATATCCTCGCTAA 2079 0.4214 MRMRMITNRTSSLFSIFCCLLCLLIISTQSCCYAQEDGFRSYSCDNGKGNYTANSIYHKNLNTLLSTLISNTQIDYGYYNFSYGQDDNKVNAVGLCQGDLNQNDCRLCLNNSITLLTQLCPNQKEAIGWYDTCMLRYSNRTIFGNHHVDDSLTVYLWNTQNATDLPVFNQNLNSLMSNLIDKAIAGDSRRKYAAASVNSTGFQNIYGVVQCTPDLSSLECDQCLEGHVSDIPACCDGKKGGRVLSPSCYIRYEVYPFFQPTAANNAPPPSSLSQPPHSSSTPTSSSEGQGQGKTNTLRIVIFVAVPTVIVSVLIGSICIYLLRVRKPRRTSESNSSDEGVEQEIITNESLQFDFDTIRVATDDFSNSNKLGQGGFGAVYKGRLSNGQMIAVKRLSRDSGQGATEFKTEVLLLVKLQHRNLVKLLGFCLEGSERLLVYEFVPNKSLDYFIFDPIKRNQLNWASRYKIIEGVARALLYLHEDSRLRIIHRDLKASNILLDDNMNPKIADFGLARLFDRDQTQGNTNQIAGTYGYMAPEYAMYGQFSTKSDVFSFGVIVLEILSGKRHIGNGNGESEEQLISFVWRNWREGTAINIADPSLSNISPNEIMRCVHIGLLCVQENLADRPNMGSIVLMLNSYSVTLPTPSEPAFFVGSRTRSRPLSDIQSGGNNSSTSNKSAQASENEASITDLYPR 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03834 692 SUPERFAMILY Protein kinase-like (PK-like) 349 654 IPR011009 -
Aip09g03834 692 Gene3D - 149 257 IPR038408 -
Aip09g03834 692 Gene3D - 19 141 IPR038408 -
Aip09g03834 692 Gene3D Phosphorylase Kinase; domain 1 325 439 - -
Aip09g03834 692 ProSiteProfiles Protein kinase domain profile. 364 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03834 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Aip09g03834 692 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Aip09g03834 692 CDD STKc_IRAK 370 635 - -
Aip09g03834 692 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 675 - -
Aip09g03834 692 ProSiteProfiles Gnk2-homologous domain profile. 39 142 IPR002902 -
Aip09g03834 692 MobiDBLite consensus disorder prediction 265 291 - -
Aip09g03834 692 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Aip09g03834 692 MobiDBLite consensus disorder prediction 276 291 - -
Aip09g03834 692 SMART serkin_6 364 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03834 692 MobiDBLite consensus disorder prediction 657 685 - -
Aip09g03834 692 Pfam Protein kinase domain 365 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03834 692 Gene3D Transferase(Phosphotransferase) domain 1 440 642 - -
Aip09g03834 692 ProSiteProfiles Gnk2-homologous domain profile. 150 257 IPR002902 -
Aip09g03834 692 MobiDBLite consensus disorder prediction 657 692 - -
Aip09g03834 692 Pfam Salt stress response/antifungal 161 254 IPR002902 -
Aip09g03834 692 Pfam Salt stress response/antifungal 44 139 IPR002902 -
Aip09g03834 692 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 15 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03834 Aip-Chr9 144898514 144901958 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03834 16 692 Receptor kinase-like Gene Family AT4G21410 47.254 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip09g03834 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03834 - - ahf:112776564 891.338